Protein : Qrob_P0653310.2 Q. robur
Protein Identifier  ? Qrob_P0653310.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR13872//PTHR13872:SF22 - 60S RIBOSOMAL PROTEIN L35 // SUBFAMILY NOT NAMED Code Enzyme  EC:2.4.99.18
Gene Prediction Quality  validated Protein length 

Sequence

Length: 536  
Kegg Orthology  K07151
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006486 protein glycosylation A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
GO:0004576 oligosaccharyl transferase activity Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa001464mg 3 508 + 506 none 61.63 821 91.70 0.0 hypothetical protein
blastp_kegg lcl|pmum:103340841 3 508 + 506 none 65.04 778 91.30 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
blastp_kegg lcl|fve:101292047 3 507 + 505 none 64.99 777 90.89 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like
blastp_kegg lcl|cmo:103501043 3 514 + 512 Gaps:2 66.84 763 89.61 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
blastp_kegg lcl|tcc:TCM_037807 3 508 + 506 Gaps:1 61.90 819 88.95 0.0 Staurosporin and temperature sensitive 3-like A isoform 1
blastp_kegg lcl|vvi:100232931 3 507 + 505 none 64.91 778 91.09 0.0 LTM1 oligosaccharyl transferase STT3 protein-like
blastp_kegg lcl|rcu:RCOM_1050370 3 510 + 508 Gaps:1 65.34 779 88.80 0.0 oligosaccharyl transferase putative (EC:2.4.1.119)
blastp_kegg lcl|csv:101210958 3 508 + 506 Gaps:2 64.95 776 89.68 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like
blastp_kegg lcl|mdm:103449627 3 508 + 506 none 65.12 777 91.30 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
blastp_kegg lcl|cit:102614913 3 523 + 521 Gaps:5 67.26 782 86.50 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like
blastp_uniprot_sprot sp|Q93ZY3|STT3A_ARATH 3 515 + 513 Gaps:3 65.98 779 86.38 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Arabidopsis thaliana GN STT3A PE 1 SV 1
blastp_uniprot_sprot sp|Q6F2Z1|STT3A_ORYSJ 3 507 + 505 Gaps:9 65.06 787 81.25 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Oryza sativa subsp. japonica GN STT3A PE 2 SV 1
blastp_uniprot_sprot sp|Q7XQ88|STT3B_ORYSJ 4 505 + 502 Gaps:60 64.63 721 55.15 4e-153 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS Oryza sativa subsp. japonica GN STT3B PE 2 SV 2
blastp_uniprot_sprot sp|Q5RCE2|STT3A_PONAB 5 505 + 501 Gaps:64 64.54 705 53.85 3e-151 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Pongo abelii GN STT3A PE 2 SV 1
blastp_uniprot_sprot sp|P46977|STT3A_HUMAN 5 505 + 501 Gaps:64 64.54 705 53.85 3e-151 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Homo sapiens GN STT3A PE 1 SV 2
blastp_uniprot_sprot sp|P46978|STT3A_MOUSE 5 505 + 501 Gaps:64 64.54 705 53.85 4e-151 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Mus musculus GN Stt3a PE 1 SV 1
blastp_uniprot_sprot sp|Q54NM9|STT3_DICDI 4 505 + 502 Gaps:69 62.32 714 55.06 5e-151 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS Dictyostelium discoideum GN stt3 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FX21|STT3B_ARATH 4 506 + 503 Gaps:49 63.67 735 51.71 2e-150 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS Arabidopsis thaliana GN STT3B PE 1 SV 1
blastp_uniprot_sprot sp|Q2KJI2|STT3A_BOVIN 5 505 + 501 Gaps:64 64.54 705 52.97 2e-150 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Bos taurus GN STT3A PE 2 SV 1
blastp_uniprot_sprot sp|Q3TDQ1|STT3B_MOUSE 4 523 + 520 Gaps:49 60.39 823 46.68 2e-136 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS Mus musculus GN Stt3b PE 1 SV 2
rpsblast_cdd gnl|CDD|145580 12 459 + 448 Gaps:61 62.92 650 32.76 5e-59 pfam02516 STT3 Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone rather than in an OTase complex and is required for N-glycosylation of asparagines.
rpsblast_cdd gnl|CDD|31478 3 507 + 505 Gaps:79 63.39 773 20.20 1e-30 COG1287 COG1287 Uncharacterized membrane protein required for N-linked glycosylation [General function prediction only].
rpsblast_kog gnl|CDD|37503 3 512 + 510 Gaps:46 64.18 751 54.98 0.0 KOG2292 KOG2292 KOG2292 Oligosaccharyltransferase STT3 subunit [Posttranslational modification protein turnover chaperones].

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 14 17 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 122 141 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 57 81 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 46 56 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 82 121 40 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 148 166 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 27 45 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 192 262 71 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 172 191 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 3 356 354 PF02516 "UniPathway:UPA00378" Oligosaccharyl transferase STT3 subunit IPR003674
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 288 535 248 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 18 26 9 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 226 518 293 PTHR13872:SF22 none none none
PANTHER 3 192 190 PTHR13872:SF22 none none none
PANTHER 226 518 293 PTHR13872 none none none
PANTHER 3 192 190 PTHR13872 none none none
Phobius 263 287 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 3 13 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 142 147 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 167 171 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

7 Localization

Analysis Start End Length
TMHMM 170 188 18
TMHMM 27 49 22
TMHMM 149 166 17
TMHMM 5 22 17
TMHMM 265 287 22
TMHMM 122 144 22
TMHMM 56 78 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting