Protein : Qrob_P0578240.2 Q. robur
Protein Identifier  ? Qrob_P0578240.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) 3.4.24.12 - Envelysin. Code Enzyme  EC:3.4.24.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 311  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0031012 extracellular matrix A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals and bacteria) or be part of the cell (as in plants).
GO:0008237 metallopeptidase activity Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0852690 1 310 + 310 Gaps:7 100.00 311 67.52 1e-143 Metalloendoproteinase 1 precursor putative (EC:3.4.24.7)
blastp_kegg lcl|tcc:TCM_044196 1 309 + 309 Gaps:5 99.68 311 67.74 5e-143 Matrixin family protein
blastp_kegg lcl|tcc:TCM_046068 1 309 + 309 Gaps:5 99.68 311 67.74 5e-143 Matrixin family protein
blastp_kegg lcl|tcc:TCM_044201 1 309 + 309 Gaps:5 99.68 311 67.42 1e-142 Matrixin family protein
blastp_kegg lcl|cit:102627001 1 310 + 310 Gaps:12 100.00 320 65.00 2e-142 metalloendoproteinase 1-like
blastp_kegg lcl|mdm:103416527 1 310 + 310 Gaps:13 100.00 309 65.70 1e-135 metalloendoproteinase 1-like
blastp_kegg lcl|vvi:100257851 20 309 + 290 Gaps:1 92.38 315 66.67 3e-134 metalloendoproteinase 1-like
blastp_kegg lcl|tcc:TCM_040549 18 309 + 292 Gaps:3 93.87 310 64.95 2e-133 Matrixin family protein putative
blastp_kegg lcl|pmum:103330192 1 310 + 310 Gaps:10 100.00 314 65.61 4e-133 metalloendoproteinase 1-like
blastp_kegg lcl|mdm:103406196 1 308 + 308 Gaps:13 99.35 309 65.15 6e-133 metalloendoproteinase 1-like
blastp_pdb 1slm_A 41 308 + 268 Gaps:44 95.69 255 40.98 1e-35 mol:protein length:255 STROMELYSIN-1
blastp_pdb 1su3_B 53 308 + 256 Gaps:40 51.11 450 39.57 4e-33 mol:protein length:450 Interstitial collagenase
blastp_pdb 1su3_A 53 308 + 256 Gaps:40 51.11 450 39.57 4e-33 mol:protein length:450 Interstitial collagenase
blastp_pdb 2xs4_A 174 308 + 135 Gaps:9 82.63 167 45.65 5e-30 mol:protein length:167 KARILYSIN PROTEASE
blastp_pdb 2xs3_B 174 308 + 135 Gaps:9 83.13 166 45.65 6e-30 mol:protein length:166 KARILYSIN PROTEASE
blastp_pdb 2xs3_A 174 308 + 135 Gaps:9 83.13 166 45.65 6e-30 mol:protein length:166 KARILYSIN PROTEASE
blastp_pdb 3ayu_A 150 310 + 161 Gaps:11 98.20 167 44.51 2e-29 mol:protein length:167 72 kDa type IV collagenase
blastp_pdb 1hov_A 150 308 + 159 Gaps:12 98.77 163 44.72 3e-29 mol:protein length:163 MATRIX METALLOPROTEINASE-2
blastp_pdb 1bzs_A 154 308 + 155 Gaps:14 96.36 165 42.77 5e-28 mol:protein length:165 NEUTROPHIL COLLAGENASE
blastp_pdb 3dpf_B 154 308 + 155 Gaps:14 97.55 163 42.77 5e-28 mol:protein length:163 Neutrophil collagenase
blastp_uniprot_sprot sp|P29136|MEP1_SOYBN 45 310 + 266 Gaps:28 84.59 305 46.90 3e-64 Metalloendoproteinase 1 OS Glycine max PE 1 SV 2
blastp_uniprot_sprot sp|P91953|HE_HEMPU 51 308 + 258 Gaps:44 38.58 591 43.86 1e-39 50 kDa hatching enzyme OS Hemicentrotus pulcherrimus PE 1 SV 1
blastp_uniprot_sprot sp|O70138|MMP8_MOUSE 10 308 + 299 Gaps:58 56.13 465 39.85 2e-35 Neutrophil collagenase OS Mus musculus GN Mmp8 PE 2 SV 2
blastp_uniprot_sprot sp|O60882|MMP20_HUMAN 54 308 + 255 Gaps:43 48.03 483 40.95 6e-35 Matrix metalloproteinase-20 OS Homo sapiens GN MMP20 PE 1 SV 3
blastp_uniprot_sprot sp|P79287|MMP20_PIG 90 308 + 219 Gaps:40 41.20 483 45.23 1e-34 Matrix metalloproteinase-20 OS Sus scrofa GN MMP20 PE 2 SV 1
blastp_uniprot_sprot sp|O18767|MMP20_BOVIN 90 308 + 219 Gaps:40 41.37 481 44.72 3e-34 Matrix metalloproteinase-20 OS Bos taurus GN MMP20 PE 1 SV 1
blastp_uniprot_sprot sp|P22757|HE_PARLI 44 308 + 265 Gaps:46 40.03 587 40.00 4e-34 Hatching enzyme OS Paracentrotus lividus PE 1 SV 1
blastp_uniprot_sprot sp|O88766|MMP8_RAT 53 308 + 256 Gaps:46 49.36 466 40.00 5e-34 Neutrophil collagenase OS Rattus norvegicus GN Mmp8 PE 2 SV 1
blastp_uniprot_sprot sp|P08254|MMP3_HUMAN 41 308 + 268 Gaps:44 51.15 477 40.98 8e-34 Stromelysin-1 OS Homo sapiens GN MMP3 PE 1 SV 2
blastp_uniprot_sprot sp|P22894|MMP8_HUMAN 54 310 + 257 Gaps:46 49.89 467 41.20 2e-33 Neutrophil collagenase OS Homo sapiens GN MMP8 PE 1 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 44 123 80 SSF47090 none none IPR002477
PIRSF 21 309 289 PIRSF001191 none none IPR016293
SUPERFAMILY 152 309 158 SSF55486 none none none
PANTHER 45 308 264 PTHR10201 none none none
SMART 155 310 156 SM00235 none Zinc-dependent metalloprotease IPR006026
Gene3D 115 309 195 G3DSA:3.40.390.10 none none IPR024079
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PRINTS 263 288 26 PR00138 none Matrixin signature IPR021190
PRINTS 113 126 14 PR00138 none Matrixin signature IPR021190
PRINTS 182 197 16 PR00138 none Matrixin signature IPR021190
PRINTS 296 309 14 PR00138 none Matrixin signature IPR021190
PRINTS 206 234 29 PR00138 none Matrixin signature IPR021190
Pfam 177 308 132 PF00413 none Matrixin IPR001818
Phobius 17 20 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 52 111 60 PF01471 none Putative peptidoglycan binding domain IPR002477
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 53 114 62 G3DSA:1.10.101.10 none none IPR002477
Phobius 21 310 290 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 22 21
SignalP_GRAM_POSITIVE 1 22 21
SignalP_EUK 1 22 21

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

0 Targeting