Protein : Qrob_P0546810.2 Q. robur
Protein Identifier  ? Qrob_P0546810.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K05287 - phosphatidylinositol glycan, class F [EC:2.7.-.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 221  
Kegg Orthology  K05287
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.
GO:0006506 GPI anchor biosynthetic process The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa011066mg 1 220 + 220 Gaps:5 95.56 225 70.70 3e-102 hypothetical protein
blastp_kegg lcl|pmum:103328226 1 220 + 220 Gaps:5 95.56 225 68.37 5e-100 uncharacterized protein C1450.15
blastp_kegg lcl|cam:101502249 11 220 + 210 Gaps:2 88.51 235 68.27 3e-99 phosphatidylinositol-glycan biosynthesis class F protein-like
blastp_kegg lcl|cit:102625326 26 220 + 195 none 87.05 224 73.33 1e-98 uncharacterized LOC102625326
blastp_kegg lcl|cic:CICLE_v10026430mg 26 220 + 195 none 87.05 224 72.31 4e-97 hypothetical protein
blastp_kegg lcl|pxb:103939883 4 220 + 217 Gaps:5 94.22 225 67.92 1e-96 uncharacterized protein C1450.15
blastp_kegg lcl|mdm:103449366 4 220 + 217 Gaps:5 94.22 225 67.92 2e-96 glycosylphosphatidylinositol anchor biosynthesis protein 11
blastp_kegg lcl|fve:101297268 2 220 + 219 Gaps:6 95.09 224 69.95 2e-96 glycosylphosphatidylinositol anchor biosynthesis protein 11-like
blastp_kegg lcl|cam:101490773 11 220 + 210 Gaps:2 64.60 322 67.31 8e-96 phosphatidylinositol-glycan biosynthesis class F protein-like
blastp_kegg lcl|pvu:PHAVU_009G194500g 23 220 + 198 none 88.00 225 64.14 2e-91 hypothetical protein
blastp_uniprot_sprot sp|Q9Y7P2|YCKF_SCHPO 83 202 + 120 Gaps:7 23.68 494 40.17 4e-18 Uncharacterized protein C1450.15 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC1450.15 PE 3 SV 2
blastp_uniprot_sprot sp|O09101|PIGF_MOUSE 102 204 + 103 Gaps:1 46.58 219 37.25 7e-16 Phosphatidylinositol-glycan biosynthesis class F protein OS Mus musculus GN Pigf PE 1 SV 1
blastp_uniprot_sprot sp|Q07326|PIGF_HUMAN 102 204 + 103 Gaps:1 46.58 219 37.25 1e-15 Phosphatidylinositol-glycan biosynthesis class F protein OS Homo sapiens GN PIGF PE 1 SV 1
blastp_uniprot_sprot sp|Q6C741|GPI11_YARLI 99 220 + 122 Gaps:7 52.47 223 31.62 3e-12 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN GPI11 PE 3 SV 1
blastp_uniprot_sprot sp|Q6BHK4|GPI11_DEBHA 62 205 + 144 Gaps:13 65.68 236 32.26 2e-10 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN GPI11 PE 3 SV 2
blastp_uniprot_sprot sp|Q871U9|GPI11_NEUCR 99 202 + 104 Gaps:5 36.40 272 35.35 5e-10 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN gpi-11 PE 3 SV 1
blastp_uniprot_sprot sp|P0C148|GPI11_MAGO7 99 220 + 122 Gaps:9 43.56 264 36.52 7e-10 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN GPI11 PE 3 SV 2
blastp_uniprot_sprot sp|Q4WIQ0|GPI11_ASPFU 99 202 + 104 Gaps:5 33.33 297 37.37 2e-09 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN gpi11 PE 3 SV 1
blastp_uniprot_sprot sp|Q4HXT5|GPI11_GIBZE 162 199 + 38 none 14.90 255 55.26 1e-08 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN GPI11 PE 3 SV 1
blastp_uniprot_sprot sp|Q5AFT2|GPI11_CANAL 84 188 + 105 Gaps:21 37.74 265 34.00 2e-06 Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS Candida albicans (strain SC5314 / ATCC MYA-2876) GN GPI11 PE 3 SV 1
rpsblast_cdd gnl|CDD|148354 28 205 + 178 Gaps:8 95.79 190 35.16 3e-43 pfam06699 PIG-F GPI biosynthesis protein family Pig-F. PIG-F is involved in glycosylphosphatidylinositol (GPI) anchor biosynthesis.
rpsblast_kog gnl|CDD|38354 98 204 + 107 Gaps:5 56.12 196 27.27 4e-13 KOG3144 KOG3144 KOG3144 Ethanolamine-P-transferase GPI11/PIG-F involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis Posttranslational modification protein turnover chaperones].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 105 115 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 29 204 176 PF06699 "UniPathway:UPA00196" GPI biosynthesis protein family Pig-F IPR009580
Phobius 211 220 10 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 84 104 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 28 205 178 PTHR15095 "UniPathway:UPA00196";signature_desc=PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS, CLASS F none IPR009580
Phobius 65 83 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 189 210 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 170 188 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 46 64 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 116 136 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 148 169 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 137 147 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 34 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 35 45 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

6 Localization

Analysis Start End Length
TMHMM 187 209 22
TMHMM 79 101 22
TMHMM 45 67 22
TMHMM 116 133 17
TMHMM 13 35 22
TMHMM 154 172 18

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting