Protein : Qrob_P0539510.2 Q. robur
Protein Identifier  ? Qrob_P0539510.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K08744 - cardiolipin synthase [EC:2.7.8.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 336  
Kegg Orthology  K08744
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008654 phospholipid biosynthetic process The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.
GO:0016780 phosphotransferase activity, for other substituted phosphate groups Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_030194 1 335 + 335 Gaps:23 100.00 340 69.41 4e-150 Cardiolipin synthase isoform 1
blastp_kegg lcl|fve:101313284 1 330 + 330 Gaps:21 98.78 329 69.54 7e-147 probable cardiolipin synthase 1-like
blastp_kegg lcl|pop:POPTR_0004s01790g 1 335 + 335 Gaps:27 100.00 342 68.13 5e-146 POPTRDRAFT_856644 CDP-alcohol phosphatidyltransferase family protein
blastp_kegg lcl|mdm:103446708 1 335 + 335 Gaps:28 100.00 345 67.25 7e-145 cardiolipin synthase mitochondrial
blastp_kegg lcl|mdm:103434523 1 335 + 335 Gaps:28 100.00 345 66.38 2e-144 cardiolipin synthase mitochondrial-like
blastp_kegg lcl|pper:PRUPE_ppa008940mg 1 304 + 304 Gaps:28 99.68 313 70.19 2e-142 hypothetical protein
blastp_kegg lcl|cit:102610437 1 332 + 332 Gaps:18 99.08 327 67.90 4e-139 probable cardiolipin synthase 1-like
blastp_kegg lcl|rcu:RCOM_0905270 1 335 + 335 Gaps:23 100.00 334 66.17 6e-139 cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase putative
blastp_kegg lcl|vvi:100241827 1 333 + 333 Gaps:37 99.43 348 65.03 6e-136 probable cardiolipin synthase 1-like
blastp_kegg lcl|cic:CICLE_v10015907mg 1 332 + 332 Gaps:18 99.08 327 66.67 6e-136 hypothetical protein
blastp_uniprot_sprot sp|Q5U2V5|CRLS1_RAT 137 334 + 198 Gaps:5 64.57 302 38.97 1e-26 Cardiolipin synthase OS Rattus norvegicus GN Crls1 PE 2 SV 1
blastp_uniprot_sprot sp|Q80ZM8|CRLS1_MOUSE 137 334 + 198 Gaps:5 64.36 303 38.97 2e-26 Cardiolipin synthase OS Mus musculus GN Crls1 PE 2 SV 1
blastp_uniprot_sprot sp|O01916|CRLS1_CAEEL 137 321 + 185 Gaps:4 75.20 246 33.51 4e-25 Probable cardiolipin synthase 1 OS Caenorhabditis elegans GN crls-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9UJA2|CRLS1_HUMAN 137 319 + 183 Gaps:4 60.13 301 37.57 2e-24 Cardiolipin synthase OS Homo sapiens GN CRLS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8MZC4|CRLS1_DROME 124 319 + 196 Gaps:10 60.87 322 32.65 2e-22 Probable cardiolipin synthase OS Drosophila melanogaster GN CLS PE 2 SV 1
blastp_uniprot_sprot sp|Q07560|CRD1_YEAST 135 322 + 188 Gaps:27 73.85 283 29.67 3e-21 Cardiolipin synthase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN CRD1 PE 1 SV 1
blastp_uniprot_sprot sp|O13899|YF38_SCHPO 133 274 + 142 Gaps:6 24.56 570 32.14 2e-15 Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC22A12.08c PE 3 SV 1
blastp_uniprot_sprot sp|P75520|PGSA_MYCPN 135 252 + 118 Gaps:11 56.83 227 34.88 1e-09 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN pgsA PE 3 SV 1
blastp_uniprot_sprot sp|P46322|PGSA_BACSU 137 235 + 99 Gaps:15 59.07 193 27.19 1e-07 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS Bacillus subtilis (strain 168) GN pgsA PE 3 SV 3
blastp_uniprot_sprot sp|Q3Z2T6|PGSA_SHISS 137 213 + 77 Gaps:8 42.31 182 40.26 1e-07 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS Shigella sonnei (strain Ss046) GN pgsA PE 3 SV 3
rpsblast_cdd gnl|CDD|178391 1 335 + 335 Gaps:16 100.00 341 66.57 1e-140 PLN02794 PLN02794 cardiolipin synthase.
rpsblast_cdd gnl|CDD|161929 136 252 + 117 Gaps:14 70.88 182 28.68 2e-12 TIGR00560 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase glycerophosphate phosphatidyltransferase PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity including Saccharamyces cerevisiae YDL142c now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
rpsblast_cdd gnl|CDD|30904 137 328 + 192 Gaps:22 93.75 192 22.22 2e-11 COG0558 PgsA Phosphatidylglycerophosphate synthase [Lipid metabolism].
rpsblast_cdd gnl|CDD|201581 137 230 + 94 Gaps:1 97.94 97 28.42 2e-11 pfam01066 CDP-OH_P_transf CDP-alcohol phosphatidyltransferase. All of these members have the ability to catalyze the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond.
rpsblast_cdd gnl|CDD|166199 135 207 + 73 Gaps:3 37.44 203 34.21 2e-09 PLN02558 PLN02558 CDP-diacylglycerol-glycerol-3-phosphate/ 3-phosphatidyltransferase.
rpsblast_kog gnl|CDD|36830 52 304 + 253 Gaps:23 97.12 243 40.68 3e-44 KOG1617 KOG1617 KOG1617 CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase [Lipid transport and metabolism].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 322 335 14 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 179 201 23 PS00379 none CDP-alcohol phosphatidyltransferases signature. IPR000462
Phobius 289 299 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 161 178 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 20 39 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 270 288 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 179 269 91 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 19 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 136 215 80 PF01066 none CDP-alcohol phosphatidyltransferase IPR000462
PANTHER 133 319 187 PTHR14269:SF11 none none none
Phobius 300 321 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 133 319 187 PTHR14269 none none none
Phobius 40 160 121 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting