Protein : Qrob_P0522330.2 Q. robur
Protein Identifier  ? Qrob_P0522330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR10434 - 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE Code Enzyme  EC:2.3.1.51
Gene Prediction Quality  validated Protein length 

Sequence

Length: 276  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016746 transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0584650 1 267 + 267 Gaps:31 99.67 299 64.77 6e-143 1-acyl-sn-glycerol-3-phosphate acyltransferase putative (EC:2.3.1.51)
blastp_kegg lcl|pvu:PHAVU_006G042300g 1 268 + 268 Gaps:31 100.00 299 65.22 1e-142 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10008983mg 1 275 + 275 Gaps:34 99.04 312 63.11 2e-140 hypothetical protein
blastp_kegg lcl|cit:102618702 1 275 + 275 Gaps:34 99.04 312 63.11 2e-140 1-acyl-sn-glycerol-3-phosphate acyltransferase-like
blastp_kegg lcl|csv:101217317 1 266 + 266 Gaps:32 99.33 298 65.54 5e-139 1-acyl-sn-glycerol-3-phosphate acyltransferase-like
blastp_kegg lcl|tcc:TCM_030900 1 275 + 275 Gaps:32 99.03 310 62.87 4e-137 1-acyl-sn-glycerol-3-phosphate acyltransferase isoform 1
blastp_kegg lcl|pop:POPTR_0011s14220g 1 267 + 267 Gaps:31 99.67 299 63.09 7e-134 POPTRDRAFT_569133 hypothetical protein
blastp_kegg lcl|cmo:103501589 1 266 + 266 Gaps:32 99.33 298 63.85 5e-132 1-acyl-sn-glycerol-3-phosphate acyltransferase-like
blastp_kegg lcl|pda:103719321 1 267 + 267 Gaps:33 95.85 313 60.33 1e-122 1-acyl-sn-glycerol-3-phosphate acyltransferase-like
blastp_kegg lcl|mus:103972439 1 266 + 266 Gaps:41 99.31 289 61.67 2e-119 1-acyl-sn-glycerol-3-phosphate acyltransferase-like
blastp_uniprot_sprot sp|Q42670|PLSC_COCNU 1 267 + 267 Gaps:34 95.78 308 58.64 1e-115 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Cocos nucifera PE 1 SV 1
blastp_uniprot_sprot sp|Q42870|PLSC_LIMDO 29 274 + 246 Gaps:33 99.29 281 55.20 4e-109 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Limnanthes douglasii GN PLSC PE 2 SV 1
blastp_uniprot_sprot sp|Q42868|PLSC_LIMAL 29 267 + 239 Gaps:33 96.80 281 55.15 5e-107 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Limnanthes alba PE 2 SV 1
blastp_uniprot_sprot sp|P44848|PLSC_HAEIN 126 262 + 137 Gaps:43 69.17 240 30.12 2e-16 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN plsC PE 3 SV 1
blastp_uniprot_sprot sp|P33333|PLSC_YEAST 106 262 + 157 Gaps:34 63.04 303 28.80 1e-14 Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SLC1 PE 1 SV 1
blastp_uniprot_sprot sp|P26647|PLSC_ECOLI 64 262 + 199 Gaps:35 93.06 245 25.44 2e-13 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Escherichia coli (strain K12) GN plsC PE 1 SV 1
blastp_uniprot_sprot sp|P0A257|PLSC_SALTY 64 262 + 199 Gaps:43 93.06 245 26.75 1e-12 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN plsC PE 3 SV 1
blastp_uniprot_sprot sp|P0A258|PLSC_SALTI 64 262 + 199 Gaps:43 93.06 245 26.75 1e-12 1-acyl-sn-glycerol-3-phosphate acyltransferase OS Salmonella typhi GN plsC PE 3 SV 1
rpsblast_cdd gnl|CDD|153251 105 250 + 146 Gaps:37 99.46 184 26.23 7e-28 cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT PlsC) Tafazzin (product of Barth syndrome gene) and similar proteins.
rpsblast_cdd gnl|CDD|30553 64 255 + 192 Gaps:38 87.06 255 21.62 2e-16 COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism].
rpsblast_cdd gnl|CDD|201856 114 209 + 96 Gaps:35 100.00 131 26.72 2e-16 pfam01553 Acyltransferase Acyltransferase. This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin the Barth syndrome gene.
rpsblast_cdd gnl|CDD|197792 127 211 + 85 Gaps:33 100.00 118 29.66 7e-14 smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate 1-acylglycerolphosphate or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin the product of the gene mutated in patients with Barth syndrome is a member of this family.
rpsblast_cdd gnl|CDD|129621 125 208 + 84 Gaps:32 87.69 130 29.82 6e-12 TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. This model describes the core homologous region of a collection of related proteins several of which are known to act as 1-acyl-sn-glycerol-3-phosphate acyltransferases (EC 2.3.1.51). Proteins scoring above the trusted cutoff are likely to have the same general activity. However there is variation among characterized members as to whether the acyl group can be donated by acyl carrier protein or coenzyme A and in the length and saturation of the donated acyl group. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase lysophosphatidic acid acyltransferase and LPA acyltransferase.
rpsblast_cdd gnl|CDD|184979 99 245 + 147 Gaps:34 72.24 245 28.81 8e-12 PRK15018 PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase Provisional.
rpsblast_cdd gnl|CDD|153253 105 204 + 100 Gaps:12 47.39 211 27.00 1e-09 cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1) glycerol-3-phosphate acyltransferase 3 (GPAT3) and similar sequences.
rpsblast_cdd gnl|CDD|153252 109 179 + 71 Gaps:7 40.41 193 26.92 2e-07 cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
rpsblast_kog gnl|CDD|38059 65 262 + 198 Gaps:34 83.33 276 23.91 2e-23 KOG2848 KOG2848 KOG2848 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism].

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 127 211 85 SM00563 none Phosphate acyltransferases IPR002123
Phobius 158 176 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 116 126 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 115 189 75 PF01553 none Acyltransferase IPR002123
Phobius 127 146 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 61 86 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 87 97 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 147 157 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 196 215 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 60 60 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 56 262 207 PTHR10434 none none none
Phobius 98 115 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 57 262 206 SSF69593 none none none
Phobius 216 275 60 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 124 189 66 G3DSA:3.40.1130.10 none none none
Phobius 177 195 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
TMHMM 64 86 22

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting