Protein : Qrob_P0503110.2 Q. robur
Protein Identifier  ? Qrob_P0503110.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=1) PTHR21311 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 506  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0017119 Golgi transport complex A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p).

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103320585 9 505 + 497 Gaps:37 84.75 590 84.80 0.0 conserved oligomeric Golgi complex subunit 8
blastp_kegg lcl|pper:PRUPE_ppa003238mg 9 505 + 497 Gaps:37 84.75 590 85.00 0.0 hypothetical protein
blastp_kegg lcl|cit:102625151 9 501 + 493 Gaps:19 83.45 568 87.34 0.0 conserved oligomeric Golgi complex subunit 8-like
blastp_kegg lcl|cic:CICLE_v10007867mg 9 501 + 493 Gaps:19 83.45 568 87.34 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s24200g 9 504 + 496 Gaps:19 83.30 575 86.01 0.0 POPTRDRAFT_866816 conserved oligomeric Golgi complex component-related family protein
blastp_kegg lcl|vvi:100245590 9 504 + 496 Gaps:19 84.24 571 82.33 0.0 conserved oligomeric Golgi complex subunit 8-like
blastp_kegg lcl|rcu:RCOM_0706270 9 505 + 497 Gaps:22 84.49 574 85.36 0.0 Conserved oligomeric Golgi complex component putative
blastp_kegg lcl|tcc:TCM_037323 9 505 + 497 Gaps:20 82.85 583 84.89 0.0 Oligomeric Golgi complex component-related / COG complex component-related isoform 1
blastp_kegg lcl|pxb:103952372 9 500 + 492 Gaps:23 83.65 575 84.62 0.0 conserved oligomeric Golgi complex subunit 8-like
blastp_kegg lcl|mdm:103428705 9 499 + 491 Gaps:25 83.54 577 84.44 0.0 conserved oligomeric Golgi complex subunit 8-like
blastp_uniprot_sprot sp|Q96MW5|COG8_HUMAN 11 422 + 412 Gaps:29 66.18 612 37.04 2e-85 Conserved oligomeric Golgi complex subunit 8 OS Homo sapiens GN COG8 PE 1 SV 2
blastp_uniprot_sprot sp|Q9JJA2|COG8_MOUSE 11 422 + 412 Gaps:29 63.28 640 37.53 5e-85 Conserved oligomeric Golgi complex subunit 8 OS Mus musculus GN Cog8 PE 2 SV 3
blastp_uniprot_sprot sp|Q2TBH9|COG8_BOVIN 11 422 + 412 Gaps:29 64.70 626 37.53 2e-84 Conserved oligomeric Golgi complex subunit 8 OS Bos taurus GN COG8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9VKH0|COG8_DROME 11 422 + 412 Gaps:32 71.23 570 32.27 1e-62 Conserved oligomeric Golgi complex subunit 8 OS Drosophila melanogaster GN CG6488 PE 2 SV 1
blastp_uniprot_sprot sp|Q55BB8|COG8_DICDI 33 418 + 386 Gaps:49 50.96 779 33.00 2e-57 Conserved oligomeric Golgi complex subunit 8 OS Dictyostelium discoideum GN cog8 PE 3 SV 1
blastp_uniprot_sprot sp|O44502|COG8_CAEEL 12 355 + 344 Gaps:39 45.09 743 23.28 3e-11 Conserved oligomeric Golgi complex subunit 8 OS Caenorhabditis elegans GN cogc-8 PE 3 SV 1
blastp_uniprot_sprot sp|Q96WW5|COG8_SCHPO 51 270 + 220 Gaps:39 61.64 378 23.61 3e-10 Conserved oligomeric Golgi complex subunit 8 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN cog8 PE 3 SV 2
rpsblast_cdd gnl|CDD|146653 14 296 + 283 Gaps:24 79.94 339 49.45 2e-87 pfam04124 Dor1 Dor1-like family. Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins which include Sec34 and Sec35.
rpsblast_kog gnl|CDD|37280 11 501 + 491 Gaps:30 82.10 581 38.78 1e-131 KOG2069 KOG2069 KOG2069 Golgi transport complex subunit [Intracellular trafficking secretion and vesicular transport].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 12 296 285 PF04124 none Dor1-like family IPR007255
SUPERFAMILY 49 282 234 SSF74788 none none IPR016159
PANTHER 158 435 278 PTHR21311 none none IPR007255
PANTHER 11 140 130 PTHR21311 none none IPR007255
PIRSF 2 504 503 PIRSF015415 none none IPR016632
PANTHER 158 435 278 PTHR21311:SF0 none none none
PANTHER 11 140 130 PTHR21311:SF0 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting