Protein : Qrob_P0497570.2 Q. robur
Protein Identifier  ? Qrob_P0497570.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) 2.2.1.1 - Transketolase. Code Enzyme  EC:2.2.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 754  
Kegg Orthology  K00615
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0004802 transketolase activity Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1611360 1 752 + 752 Gaps:35 99.87 752 90.01 0.0 transketolase putative (EC:2.2.1.1)
blastp_kegg lcl|cic:CICLE_v10018991mg 1 752 + 752 Gaps:17 99.87 748 88.49 0.0 hypothetical protein
blastp_kegg lcl|cit:102622121 1 752 + 752 Gaps:17 99.87 748 88.49 0.0 transketolase-2 chloroplastic-like
blastp_kegg lcl|tcc:TCM_005533 1 752 + 752 Gaps:20 99.87 745 89.52 0.0 Transketolase
blastp_kegg lcl|pmum:103331769 1 753 + 753 Gaps:13 100.00 752 88.83 0.0 transketolase chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa001865mg 1 753 + 753 Gaps:13 100.00 752 88.83 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s14730g 1 753 + 753 Gaps:17 100.00 744 88.84 0.0 POPTRDRAFT_552034 transketolase family protein
blastp_kegg lcl|pvu:PHAVU_007G006600g 1 753 + 753 Gaps:17 100.00 740 88.78 0.0 hypothetical protein
blastp_kegg lcl|cmo:103499017 1 752 + 752 Gaps:20 99.87 745 87.77 0.0 transketolase chloroplastic
blastp_kegg lcl|gmx:100805786 1 753 + 753 Gaps:17 100.00 740 88.51 0.0 transketolase chloroplastic-like
blastp_pdb 1itz_C 79 752 + 674 none 99.85 675 88.13 0.0 mol:protein length:675 Transketolase
blastp_pdb 1itz_B 79 752 + 674 none 99.85 675 88.13 0.0 mol:protein length:675 Transketolase
blastp_pdb 1itz_A 79 752 + 674 none 99.85 675 88.13 0.0 mol:protein length:675 Transketolase
blastp_pdb 3m49_B 96 752 + 657 Gaps:10 95.22 690 54.79 0.0 mol:protein length:690 Transketolase
blastp_pdb 3m49_A 96 752 + 657 Gaps:10 95.22 690 54.79 0.0 mol:protein length:690 Transketolase
blastp_pdb 3hyl_B 96 752 + 657 Gaps:10 95.22 690 54.79 0.0 mol:protein length:690 Transketolase
blastp_pdb 3hyl_A 96 752 + 657 Gaps:10 95.22 690 54.79 0.0 mol:protein length:690 Transketolase
blastp_pdb 1r9j_B 91 753 + 663 Gaps:21 96.88 673 52.45 0.0 mol:protein length:673 transketolase
blastp_pdb 1r9j_A 91 753 + 663 Gaps:21 96.88 673 52.45 0.0 mol:protein length:673 transketolase
blastp_pdb 1qgd_B 98 752 + 655 Gaps:13 98.79 662 51.99 0.0 mol:protein length:662 PROTEIN (TRANSKETOLASE)
blastp_uniprot_sprot sp|F4IW47|TKTC2_ARATH 1 752 + 752 Gaps:14 99.87 741 84.59 0.0 Transketolase-2 chloroplastic OS Arabidopsis thaliana GN TKL-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q43848|TKTC_SOLTU 1 753 + 753 Gaps:12 100.00 741 84.62 0.0 Transketolase chloroplastic OS Solanum tuberosum PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWV0|TKTC1_ARATH 1 752 + 752 Gaps:12 99.87 741 84.19 0.0 Transketolase-1 chloroplastic OS Arabidopsis thaliana GN TKL-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7SIC9|TKTC_MAIZE 79 752 + 674 none 99.85 675 88.13 0.0 Transketolase chloroplastic OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|O20250|TKTC_SPIOL 82 752 + 671 Gaps:5 89.88 741 87.09 0.0 Transketolase chloroplastic OS Spinacia oleracea PE 1 SV 1
blastp_uniprot_sprot sp|Q42677|TKT7_CRAPL 88 752 + 665 Gaps:2 98.67 676 78.41 0.0 Transketolase 7 OS Craterostigma plantagineum GN TKT7 PE 2 SV 1
blastp_uniprot_sprot sp|Q42675|TKTA_CRAPL 92 752 + 661 Gaps:1 97.50 679 79.15 0.0 Transketolase 10 OS Craterostigma plantagineum GN TKT10 PE 2 SV 1
blastp_uniprot_sprot sp|Q42676|TKTC_CRAPL 235 752 + 518 none 99.81 519 88.61 0.0 Transketolase chloroplastic (Fragment) OS Craterostigma plantagineum GN TKT3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8YRU9|TKT_NOSS1 88 752 + 665 Gaps:4 99.25 670 65.56 0.0 Transketolase OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN tkt PE 1 SV 1
blastp_uniprot_sprot sp|Q9KAD7|TKT_BACHD 96 752 + 657 Gaps:11 98.20 666 54.59 0.0 Transketolase OS Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN tkt PE 3 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 93 420 328 SSF52518 none none IPR029061
PANTHER 88 752 665 PTHR11624:SF60 none none none
SUPERFAMILY 619 752 134 SSF52922 none none IPR009014
Pfam 95 426 332 PF00456 "KEGG:00730+2.2.1.7","KEGG:00900+2.2.1.7","MetaCyc:PWY-6891","MetaCyc:PWY-6892","MetaCyc:PWY-7560","UniPathway:UPA00064" Transketolase, thiamine diphosphate binding domain IPR005474
Gene3D 79 412 334 G3DSA:3.40.50.970 none none IPR029061
Gene3D 626 752 127 G3DSA:3.40.50.920 none none IPR009014
Gene3D 422 620 199 G3DSA:3.40.50.970 none none IPR029061
Pfam 638 745 108 PF02780 none Transketolase, C-terminal domain IPR005476
Phobius 18 753 736 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 426 615 190 SSF52518 none none IPR029061
SMART 443 615 173 SM00861 none Transketolase, pyrimidine binding domain IPR005475
TIGRFAM 95 752 658 TIGR00232 "KEGG:00030+2.2.1.1","KEGG:00710+2.2.1.1","MetaCyc:PWY-1861","MetaCyc:PWY-5723","MetaCyc:PWY-6901" tktlase_bact: transketolase IPR005478
Phobius 2 13 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Coils 396 417 22 Coil none none none
ProSitePatterns 557 573 17 PS00802 "KEGG:00730+2.2.1.7","KEGG:00900+2.2.1.7","MetaCyc:PWY-6891","MetaCyc:PWY-6892","MetaCyc:PWY-7560","UniPathway:UPA00064" Transketolase signature 2. IPR020826
ProSitePatterns 101 121 21 PS00801 "KEGG:00730+2.2.1.7","KEGG:00900+2.2.1.7","MetaCyc:PWY-6891","MetaCyc:PWY-6892","MetaCyc:PWY-7560","UniPathway:UPA00064" Transketolase signature 1. IPR005474
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 14 17 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 88 752 665 PTHR11624 none none none
Pfam 444 614 171 PF02779 none Transketolase, pyrimidine binding domain IPR005475

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 17 16

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting