Protein : Qrob_P0492160.2 Q. robur
Protein Identifier  ? Qrob_P0492160.2 Organism . Name  Quercus robur
Protein Description  (M=13) PTHR22595:SF34 - BASIC ENDOCHITINASE B (PTHR22595:SF34) Alias (in v1)  Qrob_P0965950.1
Code Enzyme  EC:3.2.1.14 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 333  
Kegg Orthology  K01183
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008646mg 5 332 + 328 Gaps:13 98.76 323 73.67 1e-164 hypothetical protein
blastp_kegg lcl|mtr:MTR_3g118390 3 324 + 322 Gaps:14 95.06 324 70.45 4e-159 Endochitinase
blastp_kegg lcl|pop:POPTR_0009s14420g 3 332 + 330 Gaps:16 100.00 318 72.01 5e-158 POPTRDRAFT_721570 hypothetical protein
blastp_kegg lcl|pmum:103334901 19 332 + 314 Gaps:11 93.81 323 74.26 2e-157 endochitinase 2-like
blastp_kegg lcl|tcc:TCM_006498 3 332 + 330 Gaps:17 100.00 321 70.09 1e-156 Basic chitinase
blastp_kegg lcl|pop:POPTR_0004s18870g 23 332 + 310 Gaps:13 93.77 321 75.08 3e-155 POPTRDRAFT_831333 chitinase family protein
blastp_kegg lcl|rcu:RCOM_0806420 2 332 + 331 Gaps:13 99.08 325 72.67 2e-154 class I chitinase putative (EC:3.2.1.14)
blastp_kegg lcl|pop:POPTR_0009s14380g 3 332 + 330 Gaps:16 100.00 318 72.33 3e-154 POPTRDRAFT_557015 Chain A family protein
blastp_kegg lcl|pvu:PHAVU_009G116600g 1 332 + 332 Gaps:14 97.25 327 67.61 4e-154 hypothetical protein
blastp_kegg lcl|mus:103979613 1 331 + 331 Gaps:26 97.44 313 70.16 1e-149 endochitinase-like
blastp_pdb 3cql_B 83 324 + 242 none 99.59 243 75.21 1e-135 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 83 324 + 242 none 99.59 243 75.21 1e-135 mol:protein length:243 Endochitinase
blastp_pdb 3iwr_B 25 329 + 305 Gaps:3 97.73 309 65.56 4e-132 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 25 329 + 305 Gaps:3 97.73 309 65.56 4e-132 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 25 329 + 305 Gaps:3 97.73 309 65.56 4e-132 mol:protein length:309 chitinase
blastp_pdb 1cns_B 83 324 + 242 none 99.59 243 66.12 4e-114 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 83 324 + 242 none 99.59 243 66.12 4e-114 mol:protein length:243 CHITINASE
blastp_pdb 1dxj_A 82 324 + 243 Gaps:2 99.59 242 66.39 5e-114 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2baa_A 83 324 + 242 none 99.59 243 66.53 5e-114 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 2z38_A 79 323 + 245 Gaps:1 99.60 247 62.20 2e-108 mol:protein length:247 Chitinase
blastp_uniprot_sprot sp|P06215|CHIT_PHAVU 1 332 + 332 Gaps:14 96.95 328 68.87 5e-157 Endochitinase OS Phaseolus vulgaris PE 1 SV 1
blastp_uniprot_sprot sp|Q41596|CHI1_THECC 3 332 + 330 Gaps:17 100.00 321 69.78 7e-157 Endochitinase 1 OS Theobroma cacao GN CHIA1 PE 2 SV 1
blastp_uniprot_sprot sp|P36361|CHI5_PHAVU 1 332 + 332 Gaps:14 97.25 327 67.61 1e-155 Endochitinase CH5B OS Phaseolus vulgaris PE 3 SV 1
blastp_uniprot_sprot sp|Q39799|CHI1_GOSHI 7 332 + 326 Gaps:13 98.46 324 70.22 3e-153 Endochitinase 1 OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|Q39785|CHI2_GOSHI 25 332 + 308 Gaps:13 99.67 302 71.10 1e-149 Endochitinase 2 (Fragment) OS Gossypium hirsutum PE 2 SV 2
blastp_uniprot_sprot sp|P52405|CHI3_SOLTU 23 332 + 310 Gaps:13 94.65 318 71.10 1e-148 Endochitinase 3 (Fragment) OS Solanum tuberosum GN CHTB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q05538|CHIC_SOLLC 23 332 + 310 Gaps:13 93.48 322 70.76 2e-148 Basic 30 kDa endochitinase OS Solanum lycopersicum GN CHI9 PE 1 SV 1
blastp_uniprot_sprot sp|P52403|CHI1_SOLTU 23 332 + 310 Gaps:13 94.65 318 70.76 5e-148 Endochitinase 1 (Fragment) OS Solanum tuberosum GN CHTB1 PE 2 SV 1
blastp_uniprot_sprot sp|P21226|CHI2_PEA 2 324 + 323 Gaps:17 94.44 324 70.59 1e-145 Endochitinase A2 OS Pisum sativum GN CHI2 PE 1 SV 2
blastp_uniprot_sprot sp|P52404|CHI2_SOLTU 23 332 + 310 Gaps:15 94.62 316 70.23 3e-145 Endochitinase 2 (Fragment) OS Solanum tuberosum GN CHTB2 PE 2 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 25 63 39 SSF57016 none none IPR001002
Phobius 16 23 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSitePatterns 35 54 20 PS00026 none Chitin recognition or binding domain signature. IPR018371
Phobius 5 15 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 225 317 93 G3DSA:1.10.530.10 none none none
Gene3D 86 151 66 G3DSA:1.10.530.10 none none none
Phobius 24 332 309 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 25 62 38 SM00270 none Chitin binding domain IPR001002
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 332 332 PTHR22595:SF34 none none none
Gene3D 173 224 52 G3DSA:3.30.20.10 none none none
PRINTS 48 55 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 33 41 9 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 41 48 8 PR00451 none Chitin-binding domain signature IPR001002
PIRSF 1 324 324 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
Gene3D 25 63 39 G3DSA:3.30.60.10 none none IPR001002
Pfam 86 317 232 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 230 240 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
SUPERFAMILY 82 324 243 SSF53955 none none IPR023346
Pfam 23 62 40 PF00187 none Chitin recognition protein IPR001002
ProSiteProfiles 23 64 42 PS50941 none Chitin-binding type-1 domain profile. IPR001002
PANTHER 1 332 332 PTHR22595 none none none

3 Localization

Analysis Start End Length
SignalP_EUK 1 23 22
SignalP_GRAM_POSITIVE 1 23 22
SignalP_GRAM_NEGATIVE 1 23 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting