Protein : Qrob_P0486310.2 Q. robur
Protein Identifier  ? Qrob_P0486310.2 Organism . Name  Quercus robur
Score  59.2 Score Type  egn
Protein Description  (M=5) K03347 - cullin 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 742  
Kegg Orthology  K03347
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0031625 ubiquitin protein ligase binding Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
GO:0031461 cullin-RING ubiquitin ligase complex Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100233054 4 741 + 738 Gaps:62 99.19 744 69.65 0.0 CUL1 cullin 1
blastp_kegg lcl|pper:PRUPE_ppa001948mg 1 741 + 741 Gaps:59 100.00 738 69.51 0.0 hypothetical protein
blastp_kegg lcl|pmum:103333883 1 741 + 741 Gaps:59 100.00 738 69.51 0.0 cullin-1
blastp_kegg lcl|cic:CICLE_v10019010mg 1 741 + 741 Gaps:59 100.00 738 69.92 0.0 hypothetical protein
blastp_kegg lcl|cit:102612067 1 741 + 741 Gaps:59 100.00 738 69.92 0.0 cullin-1-like
blastp_kegg lcl|pop:POPTR_0008s22590g 4 741 + 738 Gaps:62 99.19 744 69.24 0.0 cullin-like protein1
blastp_kegg lcl|tcc:TCM_021183 4 741 + 738 Gaps:62 99.19 744 69.65 0.0 Cullin 1 isoform 1
blastp_kegg lcl|cic:CICLE_v10004406mg 4 741 + 738 Gaps:62 99.19 744 69.38 0.0 hypothetical protein
blastp_kegg lcl|cit:102625018 4 741 + 738 Gaps:62 99.19 744 69.38 0.0 cullin-1-like
blastp_kegg lcl|rcu:RCOM_0680540 4 741 + 738 Gaps:62 99.19 744 69.51 0.0 Cullin-1 putative
blastp_pdb 4a0k_A 43 741 + 699 Gaps:73 90.84 742 36.20 2e-113 mol:protein length:742 CULLIN-4A
blastp_pdb 2hye_C 43 741 + 699 Gaps:73 88.80 759 36.20 4e-113 mol:protein length:759 Cullin-4A
blastp_pdb 4a0l_H 43 741 + 699 Gaps:73 92.84 726 35.76 2e-107 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0l_E 43 741 + 699 Gaps:73 92.84 726 35.76 2e-107 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0c_E 43 741 + 699 Gaps:73 90.96 741 35.76 3e-107 mol:protein length:741 CULLIN-4B
blastp_pdb 4a0c_C 43 741 + 699 Gaps:73 90.96 741 35.76 3e-107 mol:protein length:741 CULLIN-4B
blastp_pdb 1u6g_A 34 741 + 708 Gaps:95 95.49 776 30.36 8e-84 mol:protein length:776 Cullin homolog 1
blastp_pdb 1ldj_A 34 741 + 708 Gaps:95 97.50 760 30.36 8e-84 mol:protein length:760 Cullin homolog 1
blastp_pdb 1ldk_B 383 741 + 359 Gaps:12 99.73 366 35.07 2e-58 mol:protein length:366 CULLIN HOMOLOG
blastp_pdb 3rtr_G 383 741 + 359 Gaps:12 99.18 368 34.79 2e-56 mol:protein length:368 Cullin-1
blastp_uniprot_sprot sp|Q94AH6|CUL1_ARATH 1 741 + 741 Gaps:59 100.00 738 67.89 0.0 Cullin-1 OS Arabidopsis thaliana GN CUL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SRZ0|CUL2_ARATH 1 741 + 741 Gaps:63 100.00 742 57.82 0.0 Cullin-2 OS Arabidopsis thaliana GN CUL2 PE 1 SV 1
blastp_uniprot_sprot sp|P0CH31|CLL1_ARATH 1 741 + 741 Gaps:79 98.75 721 61.10 0.0 Putative cullin-like protein 1 OS Arabidopsis thaliana GN At1g43140 PE 3 SV 1
blastp_uniprot_sprot sp|Q54NZ5|CUL3_DICDI 43 741 + 699 Gaps:98 93.24 769 35.01 1e-117 Cullin-3 OS Dictyostelium discoideum GN culC PE 3 SV 1
blastp_uniprot_sprot sp|Q9XIE9|CLL2_ARATH 9 352 + 344 Gaps:28 94.12 374 54.26 1e-114 Putative cullin-like protein 2 OS Arabidopsis thaliana GN At1g59790 PE 3 SV 2
blastp_uniprot_sprot sp|Q13619|CUL4A_HUMAN 43 741 + 699 Gaps:73 88.80 759 36.20 1e-112 Cullin-4A OS Homo sapiens GN CUL4A PE 1 SV 3
blastp_uniprot_sprot sp|Q3TCH7|CUL4A_MOUSE 43 741 + 699 Gaps:75 88.80 759 35.76 3e-107 Cullin-4A OS Mus musculus GN Cul4a PE 1 SV 1
blastp_uniprot_sprot sp|A2A432|CUL4B_MOUSE 43 741 + 699 Gaps:73 69.48 970 36.05 1e-105 Cullin-4B OS Mus musculus GN Cul4b PE 1 SV 1
blastp_uniprot_sprot sp|Q13620|CUL4B_HUMAN 43 741 + 699 Gaps:73 73.82 913 35.76 5e-105 Cullin-4B OS Homo sapiens GN CUL4B PE 1 SV 4
blastp_uniprot_sprot sp|Q9ZVH4|CUL3A_ARATH 43 741 + 699 Gaps:84 93.03 732 34.51 7e-105 Cullin-3A OS Arabidopsis thaliana GN CUL3A PE 1 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 654 741 88 SSF46785 none none none
Gene3D 9 139 131 G3DSA:1.20.1310.10 none none none
Gene3D 389 495 107 G3DSA:1.20.1310.10 none none none
SUPERFAMILY 8 340 333 SSF74788 none none IPR016159
SUPERFAMILY 368 383 16 SSF74788 none none IPR016159
Pfam 28 645 618 PF00888 none Cullin family IPR001373
ProSiteProfiles 388 616 229 PS50069 "UniPathway:UPA00143" Cullin family profile. IPR016158
Gene3D 644 741 98 G3DSA:1.10.10.10 none none IPR011991
ProSitePatterns 714 741 28 PS01256 "UniPathway:UPA00143" Cullin family signature. IPR016157
SMART 668 735 68 SM00884 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
SMART 417 566 150 SM00182 "UniPathway:UPA00143" Cullin IPR016158
SUPERFAMILY 388 654 267 SSF75632 "UniPathway:UPA00143" none IPR016158
Gene3D 253 343 91 G3DSA:1.20.1310.10 none none none
Gene3D 503 575 73 G3DSA:4.10.1030.10 none none none
Pfam 668 734 67 PF10557 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Gene3D 576 643 68 G3DSA:1.10.10.10 none none IPR011991
PANTHER 371 741 371 PTHR11932 none none none
PANTHER 4 343 340 PTHR11932 none none none
Gene3D 140 247 108 G3DSA:1.20.1310.10 none none none
PANTHER 371 741 371 PTHR11932:SF60 none none none
PANTHER 4 343 340 PTHR11932:SF60 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting