Protein : Qrob_P0483390.2 Q. robur
Protein Identifier  ? Qrob_P0483390.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K13248 - pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74] Code Enzyme  EC:3.6.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 272  
Kegg Orthology  K13248
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016791 phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa009904mg 1 271 + 271 Gaps:1 100.00 272 79.41 4e-162 hypothetical protein
blastp_kegg lcl|pmum:103327728 1 271 + 271 Gaps:2 100.00 273 79.49 1e-160 inorganic pyrophosphatase 1-like
blastp_kegg lcl|pxb:103957156 1 271 + 271 Gaps:4 100.00 269 79.55 7e-160 inorganic pyrophosphatase 1-like
blastp_kegg lcl|tcc:TCM_029005 1 271 + 271 Gaps:5 100.00 274 78.83 1e-159 Pyridoxal phosphate phosphatase-related protein
blastp_kegg lcl|mdm:103453549 1 271 + 271 Gaps:4 100.00 269 79.18 3e-159 inorganic pyrophosphatase 1-like
blastp_kegg lcl|fve:101300336 1 271 + 271 Gaps:3 100.00 272 78.31 2e-156 inorganic pyrophosphatase 1-like
blastp_kegg lcl|pxb:103960473 1 271 + 271 Gaps:4 100.00 269 79.55 4e-156 inorganic pyrophosphatase 1-like
blastp_kegg lcl|cic:CICLE_v10026096mg 1 271 + 271 Gaps:4 85.67 321 75.64 8e-155 hypothetical protein
blastp_kegg lcl|cit:102617018 1 271 + 271 Gaps:4 100.00 275 75.64 3e-154 inorganic pyrophosphatase 1-like
blastp_kegg lcl|pper:PRUPE_ppa021956mg 1 271 + 271 Gaps:4 100.00 271 77.49 8e-154 hypothetical protein
blastp_uniprot_sprot sp|Q67YC0|PPSP1_ARATH 4 271 + 268 Gaps:12 94.92 295 65.36 4e-129 Inorganic pyrophosphatase 1 OS Arabidopsis thaliana GN PS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FZ62|PPSP2_ARATH 4 254 + 251 Gaps:7 92.47 279 66.67 1e-124 Inorganic pyrophosphatase 2 OS Arabidopsis thaliana GN At1g17710 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SU92|PPSP3_ARATH 1 243 + 243 Gaps:2 100.00 245 54.29 2e-94 Inorganic pyrophosphatase 3 OS Arabidopsis thaliana GN At4g29530 PE 2 SV 1
blastp_uniprot_sprot sp|Q6DBV4|PHOP1_DANRE 4 236 + 233 Gaps:20 87.10 279 34.16 4e-34 Probable phosphatase phospho1 OS Danio rerio GN phospho1 PE 2 SV 1
blastp_uniprot_sprot sp|Q66KD6|PHOP2_XENTR 5 226 + 222 Gaps:19 94.54 238 33.33 2e-30 Probable phosphatase phospho2 OS Xenopus tropicalis GN phospho2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8R2H9|PHOP1_MOUSE 4 235 + 232 Gaps:17 89.51 267 31.80 3e-29 Phosphoethanolamine/phosphocholine phosphatase OS Mus musculus GN Phospho1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8TCT1|PHOP1_HUMAN 4 236 + 233 Gaps:17 89.89 267 31.67 2e-28 Phosphoethanolamine/phosphocholine phosphatase OS Homo sapiens GN PHOSPHO1 PE 1 SV 1
blastp_uniprot_sprot sp|O73884|PHOP1_CHICK 5 236 + 232 Gaps:23 89.18 268 33.89 5e-28 Phosphoethanolamine/phosphocholine phosphatase OS Gallus gallus GN PHOSPHO1 PE 2 SV 1
blastp_uniprot_sprot sp|Q2KI06|PHOP2_BOVIN 4 209 + 206 Gaps:20 87.97 241 32.08 3e-26 Pyridoxal phosphate phosphatase PHOSPHO2 OS Bos taurus GN PHOSPHO2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9D9M5|PHOP2_MOUSE 4 235 + 232 Gaps:16 98.76 241 30.25 1e-25 Pyridoxal phosphate phosphatase PHOSPHO2 OS Mus musculus GN Phospho2 PE 2 SV 1
rpsblast_cdd gnl|CDD|203542 4 234 + 231 Gaps:13 100.00 234 58.55 2e-96 pfam06888 Put_Phosphatase Putative Phosphatase. This family contains a number of putative eukaryotic acid phosphatases. Some family members represent the products of the PSI14 phosphatase family in Lycopersicon esculentum (Tomato).
rpsblast_cdd gnl|CDD|211659 3 198 + 196 Gaps:12 100.00 190 35.79 9e-51 TIGR01489 DKMTPPase-SF 2 3-diketo-5-methylthio-1-phosphopentane phosphatase. This phosphatase is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. With the exception of OMNI|NTL01BS01361 from B. subtilis and GP|15024582 from Clostridium acetabutylicum the members of this group are all eukaryotic spanning metazoa plants and fungi. The B. subtilus gene (YkrX renamed MtnX) is part of an operon for the conversion of methylthioribose (MTR) to methionine. It works with the enolase MtnW a RuBisCO homolog. The combination of MtnW and MtnX achieves the same overall reaction as the enolase-phosphatase MtnC. The function of MtnX was shown by Ashida et al. (2003) to be 2 3-diketo-5-methylthio-1-phosphopentane phosphatase rather than 2 3-diketo-5-methylthio-1-phosphopentane phosphatase as proposed earlier. See the Genome Property for methionine salvage for more details. In eukaryotes methionine salvage from methylthioadenosine also occurs. It seems reasonable that members of this family in eukaryotes fulfill a similar role as in Bacillus. A more specific equivalog-level model is TIGR03333. Note that a member of this family from S. cerevisiae is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus considering the fold of the HAD catalytic domain is unlikely to be a transmembrane region in fact.
rpsblast_cdd gnl|CDD|162386 5 188 + 184 Gaps:19 100.00 177 27.12 3e-21 TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily subfamily IB phosphoserine phosphatase-like. This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA B C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately breaking them at a an apparent phylogenetic bifurcation so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture none of these sequences has sufficient evidence for this assignment. If such should be found this model should be retired while the PSPase model should be broadened to include these sequences.
rpsblast_cdd gnl|CDD|34074 1 186 + 186 Gaps:22 80.00 220 25.57 6e-07 COG4359 COG4359 Uncharacterized conserved protein [Function unknown].
rpsblast_kog gnl|CDD|38330 1 242 + 242 Gaps:11 95.70 256 54.29 2e-86 KOG3120 KOG3120 KOG3120 Predicted haloacid dehalogenase-like hydrolase [General function prediction only].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 1 238 238 PIRSF031051 none none IPR016965
PANTHER 4 247 244 PTHR20889:SF0 none none none
TIGRFAM 4 198 195 TIGR01489 none DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase IPR006384
Gene3D 5 127 123 G3DSA:3.40.50.1000 none none IPR023214
TIGRFAM 5 186 182 TIGR01488 none HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB IPR006383
SUPERFAMILY 5 221 217 SSF56784 none none IPR023214
Pfam 4 234 231 PF06888 none Putative Phosphatase IPR016965
PANTHER 4 247 244 PTHR20889 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting