Protein : Qrob_P0480010.2 Q. robur
Protein Identifier  ? Qrob_P0480010.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PF03468 - XS domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 210  
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0031047 gene silencing by RNA Any process in which RNA molecules inactivate expression of target genes.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_027414 1 204 + 204 Gaps:17 34.91 633 58.37 5e-78 XH/XS domain-containing protein
blastp_kegg lcl|rcu:RCOM_0470910 1 204 + 204 Gaps:17 34.69 637 57.01 1e-75 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa002776mg 2 204 + 203 Gaps:17 34.65 635 56.36 5e-73 hypothetical protein
blastp_kegg lcl|pmum:103328166 2 204 + 203 Gaps:17 34.65 635 55.91 6e-72 interaptin-like
blastp_kegg lcl|cit:102629124 1 204 + 204 Gaps:17 34.97 632 54.30 8e-70 myosin-10-like
blastp_kegg lcl|cic:CICLE_v10025142mg 1 204 + 204 Gaps:17 34.86 634 54.30 8e-70 hypothetical protein
blastp_kegg lcl|vvi:100252420 2 204 + 203 Gaps:17 34.76 633 54.09 2e-69 uncharacterized LOC100252420
blastp_kegg lcl|mdm:103424873 2 204 + 203 Gaps:17 34.70 634 54.55 3e-69 putative leucine-rich repeat-containing protein DDB_G0290503
blastp_kegg lcl|gmx:100798940 2 204 + 203 Gaps:23 34.02 629 54.67 3e-68 protein MLP1-like
blastp_kegg lcl|mdm:103438740 2 204 + 203 Gaps:17 34.70 634 53.64 1e-67 putative leucine-rich repeat-containing protein DDB_G0290503
rpsblast_cdd gnl|CDD|190648 1 106 + 106 Gaps:3 92.24 116 33.64 6e-18 pfam03468 XS XS domain. The XS (rice gene X and SGS3) domain is found in a family of plant proteins including gene X and SGS3. SGS3 is thought to be involved in post-transcriptional gene silencing (PTGS). This domain contains a conserved aspartate residue that may be functionally important. The XS domain has recently been predicted to possess an RRM-like RNA-binding domain by fold recognition.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 1 106 106 PF03468 none XS domain IPR005380
Coils 181 209 29 Coil none none none
Coils 134 155 22 Coil none none none

0 Localization

0 Qtllist

0 Targeting