Protein : Qrob_P0457750.2 Q. robur
Protein Identifier  ? Qrob_P0457750.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569//KOG4845 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. // NADH dehydrogenase subunit 4 [Energy production and conversion]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 587  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103329334 1 586 + 586 Gaps:60 100.00 536 76.49 0.0 probable plastidic glucose transporter 1
blastp_kegg lcl|pper:PRUPE_ppa003996mg 1 586 + 586 Gaps:64 100.00 536 77.24 0.0 hypothetical protein
blastp_kegg lcl|mdm:103404951 1 586 + 586 Gaps:68 97.84 556 75.55 0.0 probable plastidic glucose transporter 1
blastp_kegg lcl|pxb:103942835 1 586 + 586 Gaps:70 100.00 546 75.09 0.0 probable plastidic glucose transporter 1
blastp_kegg lcl|vvi:100261947 1 586 + 586 Gaps:68 100.00 546 72.16 0.0 probable plastidic glucose transporter 1-like
blastp_kegg lcl|cit:102616741 1 586 + 586 Gaps:64 100.00 532 74.44 0.0 probable plastidic glucose transporter 1-like
blastp_kegg lcl|tcc:TCM_002160 1 584 + 584 Gaps:64 86.51 608 75.67 0.0 Major facilitator superfamily protein isoform 1
blastp_kegg lcl|fve:101303437 1 586 + 586 Gaps:62 97.07 546 74.53 0.0 probable plastidic glucose transporter 1-like
blastp_kegg lcl|pop:POPTR_0014s05970g 1 586 + 586 Gaps:74 100.00 518 74.13 0.0 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_470494 1 578 + 578 Gaps:70 99.04 521 74.42 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q0WVE9|PLST1_ARATH 54 578 + 525 Gaps:54 89.89 524 76.86 0.0 Probable plastidic glucose transporter 1 OS Arabidopsis thaliana GN At1g05030 PE 2 SV 2
blastp_uniprot_sprot sp|Q2V4B9|PLST3_ARATH 34 582 + 549 Gaps:59 98.99 495 43.47 3e-114 Probable plastidic glucose transporter 3 OS Arabidopsis thaliana GN At1g79820 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FYG3|PLST2_ARATH 72 577 + 506 Gaps:58 91.68 493 46.68 5e-114 Probable plastidic glucose transporter 2 OS Arabidopsis thaliana GN At1g67300 PE 2 SV 1
blastp_uniprot_sprot sp|Q56ZZ7|PLST4_ARATH 86 578 + 493 Gaps:55 80.22 546 42.24 2e-110 Plastidic glucose transporter 4 OS Arabidopsis thaliana GN At5g16150 PE 1 SV 2
blastp_uniprot_sprot sp|C0SPB2|YWTG_BACSU 93 586 + 494 Gaps:71 93.87 457 34.03 2e-53 Putative metabolite transport protein YwtG OS Bacillus subtilis (strain 168) GN ywtG PE 3 SV 1
blastp_uniprot_sprot sp|P46333|CSBC_BACSU 93 577 + 485 Gaps:78 92.62 461 33.02 1e-47 Probable metabolite transport protein CsbC OS Bacillus subtilis (strain 168) GN csbC PE 1 SV 3
blastp_uniprot_sprot sp|Q07647|GTR3_RAT 89 573 + 485 Gaps:73 90.87 493 31.25 1e-46 Solute carrier family 2 facilitated glucose transporter member 3 OS Rattus norvegicus GN Slc2a3 PE 1 SV 1
blastp_uniprot_sprot sp|P47842|GTR3_CANFA 91 586 + 496 Gaps:73 92.73 495 29.85 7e-43 Solute carrier family 2 facilitated glucose transporter member 3 OS Canis familiaris GN SLC2A3 PE 2 SV 1
blastp_uniprot_sprot sp|P32037|GTR3_MOUSE 89 573 + 485 Gaps:73 90.87 493 30.36 2e-42 Solute carrier family 2 facilitated glucose transporter member 3 OS Mus musculus GN Slc2a3 PE 1 SV 1
blastp_uniprot_sprot sp|P11166|GTR1_HUMAN 92 573 + 482 Gaps:79 90.45 492 32.36 3e-42 Solute carrier family 2 facilitated glucose transporter member 1 OS Homo sapiens GN SLC2A1 PE 1 SV 2
rpsblast_cdd gnl|CDD|200987 89 575 + 487 Gaps:69 99.33 449 33.86 4e-68 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 85 573 + 489 Gaps:75 94.80 481 34.21 1e-63 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 89 574 + 486 Gaps:98 95.20 479 28.07 5e-40 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|176954 205 255 + 51 none 10.24 498 86.27 8e-26 CHL00011 ndhD NADH dehydrogenase subunit 4.
rpsblast_cdd gnl|CDD|183596 205 255 + 51 none 10.12 504 66.67 3e-18 PRK12561 PRK12561 NAD(P)H-quinone oxidoreductase subunit 4 Provisional.
rpsblast_cdd gnl|CDD|179442 205 255 + 51 none 9.71 525 62.75 1e-16 PRK02546 PRK02546 NAD(P)H-quinone oxidoreductase subunit 4 Provisional.
rpsblast_cdd gnl|CDD|162097 121 572 + 452 Gaps:95 75.45 505 28.61 1e-12 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|119392 89 562 + 474 Gaps:15 89.77 352 29.11 4e-12 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|31212 193 255 + 63 none 12.68 497 36.51 1e-11 COG1008 NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion].
rpsblast_cdd gnl|CDD|200147 191 255 + 65 Gaps:4 14.35 481 33.33 1e-10 TIGR01972 NDH_I_M proton-translocating NADH-quinone oxidoreductase chain M. This model describes the 13th (based on E. coli) structural gene M of bacterial NADH dehydrogenase I as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex.

45 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 445 464 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 5 205 201 PTHR24063:SF2 none none none
PANTHER 260 586 327 PTHR24063:SF2 none none none
Phobius 233 256 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 181 202 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 211 227 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 564 586 23 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 82 104 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 501 511 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 476 500 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 320 379 60 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 437 444 8 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 465 475 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 145 155 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 156 175 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 533 543 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 203 210 8 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 87 207 121 G3DSA:1.20.1250.20 none none none
Gene3D 262 324 63 G3DSA:1.20.1250.20 none none none
Gene3D 383 572 190 G3DSA:1.20.1250.20 none none none
SUPERFAMILY 245 574 330 SSF103473 none none IPR020846
PRINTS 478 499 22 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 391 401 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 96 106 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 181 200 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
Phobius 124 144 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 176 180 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 257 267 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 512 532 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 88 566 479 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846

13 Localization

Analysis Start End Length
TMHMM 156 173 17
TMHMM 541 563 22
TMHMM 478 500 22
TMHMM 180 202 22
TMHMM 512 531 19
TMHMM 89 111 22
TMHMM 233 255 22
TMHMM 446 468 22
TMHMM 380 402 22
TMHMM 124 146 22
TMHMM 268 290 22
TMHMM 412 434 22
TMHMM 300 319 19

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting