Protein : Qrob_P0440150.2 Q. robur
Protein Identifier  ? Qrob_P0440150.2 Organism . Name  Quercus robur
Score  58.1 Score Type  egn
Protein Description  (M=1) PTHR11977 - VILLIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1093  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0007010 cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.
GO:0003779 actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO:0051015 actin filament binding Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
GO:0051017 actin filament bundle assembly The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10006928mg 69 1092 + 1024 Gaps:74 100.00 964 82.05 0.0 hypothetical protein
blastp_kegg lcl|cit:102611628 69 1092 + 1024 Gaps:122 99.08 983 82.55 0.0 villin-3-like
blastp_kegg lcl|pop:POPTR_0016s05650g 69 1092 + 1024 Gaps:96 98.05 975 82.85 0.0 POPTRDRAFT_576360 Villin 2 family protein
blastp_kegg lcl|tcc:TCM_024630 69 1092 + 1024 Gaps:77 98.06 980 83.04 0.0 Villin 2 isoform 1
blastp_kegg lcl|pmum:103322029 69 1092 + 1024 Gaps:135 99.08 980 81.15 0.0 villin-3-like
blastp_kegg lcl|mdm:103449750 69 1092 + 1024 Gaps:134 99.07 967 81.21 0.0 villin-3-like
blastp_kegg lcl|pper:PRUPE_ppa000858mg 69 1092 + 1024 Gaps:147 99.07 968 81.23 0.0 hypothetical protein
blastp_kegg lcl|cmo:103486814 69 1092 + 1024 Gaps:77 98.07 986 79.32 0.0 villin-3
blastp_kegg lcl|pxb:103946502 69 1092 + 1024 Gaps:87 98.03 966 80.57 0.0 villin-3-like
blastp_kegg lcl|mdm:103431026 69 1092 + 1024 Gaps:87 98.03 966 80.36 0.0 villin-3-like
blastp_pdb 3ffn_B 69 809 + 741 Gaps:111 89.51 782 37.57 5e-117 mol:protein length:782 Gelsolin
blastp_pdb 3ffn_A 69 809 + 741 Gaps:111 89.51 782 37.57 5e-117 mol:protein length:782 Gelsolin
blastp_pdb 1d0n_B 69 807 + 739 Gaps:115 95.75 729 36.96 1e-116 mol:protein length:729 HORSE PLASMA GELSOLIN
blastp_pdb 1d0n_A 69 807 + 739 Gaps:115 95.75 729 36.96 1e-116 mol:protein length:729 HORSE PLASMA GELSOLIN
blastp_pdb 2fgh_B 69 807 + 739 Gaps:115 95.49 731 36.96 2e-116 mol:protein length:731 gelsolin
blastp_pdb 2fgh_A 69 807 + 739 Gaps:115 95.49 731 36.96 2e-116 mol:protein length:731 gelsolin
blastp_pdb 3ffk_D 69 804 + 736 Gaps:79 93.90 377 50.00 2e-66 mol:protein length:377 plasma gelsolin
blastp_pdb 3ffk_A 69 804 + 736 Gaps:79 93.90 377 50.00 2e-66 mol:protein length:377 plasma gelsolin
blastp_pdb 1rgi_G 69 804 + 736 Gaps:87 95.38 346 49.70 2e-64 mol:protein length:346 Gelsolin
blastp_pdb 1j72_A 69 804 + 736 Gaps:81 94.24 347 49.24 6e-51 mol:protein length:347 Macrophage capping protein
blastp_uniprot_sprot sp|O81644|VILI2_ARATH 69 1092 + 1024 Gaps:133 99.28 976 73.79 0.0 Villin-2 OS Arabidopsis thaliana GN VLN2 PE 1 SV 2
blastp_uniprot_sprot sp|O81645|VILI3_ARATH 69 1092 + 1024 Gaps:130 99.07 965 73.85 0.0 Villin-3 OS Arabidopsis thaliana GN VLN3 PE 1 SV 2
blastp_uniprot_sprot sp|O65570|VILI4_ARATH 69 1092 + 1024 Gaps:91 98.05 974 48.69 0.0 Villin-4 OS Arabidopsis thaliana GN VLN4 PE 1 SV 1
blastp_uniprot_sprot sp|O81643|VILI1_ARATH 51 1092 + 1042 Gaps:91 87.46 909 47.80 0.0 Villin-1 OS Arabidopsis thaliana GN VLN1 PE 2 SV 2
blastp_uniprot_sprot sp|P20305|GELS_PIG 69 809 + 741 Gaps:85 90.67 772 37.57 1e-116 Gelsolin (Fragment) OS Sus scrofa GN GSN PE 1 SV 1
blastp_uniprot_sprot sp|P06396|GELS_HUMAN 69 809 + 741 Gaps:111 89.51 782 37.57 2e-116 Gelsolin OS Homo sapiens GN GSN PE 1 SV 1
blastp_uniprot_sprot sp|Q28372|GELS_HORSE 69 807 + 739 Gaps:115 95.49 731 36.96 6e-116 Gelsolin OS Equus caballus GN GSN PE 1 SV 2
blastp_uniprot_sprot sp|Q3SX14|GELS_BOVIN 69 809 + 741 Gaps:81 95.76 731 36.71 1e-115 Gelsolin OS Bos taurus GN GSN PE 2 SV 1
blastp_uniprot_sprot sp|P13020|GELS_MOUSE 69 809 + 741 Gaps:95 89.74 780 36.57 4e-115 Gelsolin OS Mus musculus GN Gsn PE 1 SV 3
blastp_uniprot_sprot sp|O93510|GELS_CHICK 69 815 + 747 Gaps:109 89.97 778 42.14 2e-113 Gelsolin OS Gallus gallus GN GSN PE 2 SV 1

43 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 66 177 112 G3DSA:3.40.20.10 none none IPR029006
Gene3D 465 579 115 G3DSA:3.40.20.10 none none IPR029006
Pfam 1057 1092 36 PF02209 none Villin headpiece domain IPR003128
SMART 713 806 94 SM00262 none Gelsolin homology domain IPR007122
SMART 68 166 99 SM00262 none Gelsolin homology domain IPR007122
SMART 599 686 88 SM00262 none Gelsolin homology domain IPR007122
SMART 471 569 99 SM00262 none Gelsolin homology domain IPR007122
SMART 331 423 93 SM00262 none Gelsolin homology domain IPR007122
SMART 215 313 99 SM00262 none Gelsolin homology domain IPR007122
PANTHER 1030 1092 63 PTHR11977 none none IPR007122
Gene3D 332 427 96 G3DSA:3.40.20.10 none none IPR029006
SUPERFAMILY 675 805 131 SSF55753 none none none
SUPERFAMILY 1023 1092 70 SSF47050 none none IPR003128
SUPERFAMILY 590 692 103 SSF55753 none none none
PRINTS 612 632 21 PR00597 none Gelsolin family signature IPR007122
PRINTS 761 780 20 PR00597 none Gelsolin family signature IPR007122
PRINTS 672 691 20 PR00597 none Gelsolin family signature IPR007122
PRINTS 402 423 22 PR00597 none Gelsolin family signature IPR007122
PRINTS 516 534 19 PR00597 none Gelsolin family signature IPR007122
PRINTS 549 569 21 PR00597 none Gelsolin family signature IPR007122
PRINTS 490 506 17 PR00597 none Gelsolin family signature IPR007122
PRINTS 732 754 23 PR00597 none Gelsolin family signature IPR007122
SMART 1057 1092 36 SM00153 none Villin headpiece domain IPR003128
SUPERFAMILY 235 319 85 SSF55753 none none none
Gene3D 1020 1092 73 G3DSA:1.10.950.10 none none IPR003128
PANTHER 1030 1092 63 PTHR11977:SF24 none none IPR030009
PANTHER 233 847 615 PTHR11977:SF24 none none IPR030009
Pfam 484 563 80 PF00626 none Gelsolin repeat IPR007123
Pfam 229 295 67 PF00626 none Gelsolin repeat IPR007123
Pfam 350 416 67 PF00626 none Gelsolin repeat IPR007123

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting