Protein : Qrob_P0432070.2 Q. robur
Protein Identifier  ? Qrob_P0432070.2 Organism . Name  Quercus robur
Score  32.2 Score Type  egn
Protein Description  (M=1) KOG0685//KOG1175//KOG1176//KOG1177//KOG1256//KOG3628 - Flavin-containing amine oxidase [Coenzyme transport and metabolism]. // Acyl-CoA synthetase [Lipid transport and metabolism]. // Acyl-CoA synthetase [Lipid transport and metabolism]. // Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]. // Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]. // Predicted AMP-binding protein [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 2318  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0031177 phosphopantetheine binding Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
GO:0004096 catalase activity Catalysis of the reaction: 2 hydrogen peroxide = O2 + 2 H2O.

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa027071mg 1 2317 + 2317 Gaps:21 100.00 2302 78.67 0.0 hypothetical protein
blastp_kegg lcl|pxb:103963721 1 2317 + 2317 Gaps:12 100.00 2311 77.85 0.0 uncharacterized LOC103963721
blastp_kegg lcl|cic:CICLE_v10017962mg 1 2317 + 2317 Gaps:12 100.00 2309 77.65 0.0 hypothetical protein
blastp_kegg lcl|cit:102618132 1 2317 + 2317 Gaps:21 100.00 2300 77.74 0.0 uncharacterized LOC102618132
blastp_kegg lcl|tcc:TCM_040504 1 2317 + 2317 Gaps:9 94.13 2454 77.32 0.0 AMP-dependent synthetase and ligase family protein
blastp_kegg lcl|pmum:103341819 1 2317 + 2317 Gaps:23 100.00 2300 78.22 0.0 uncharacterized LOC103341819
blastp_kegg lcl|pxb:103954620 1 2317 + 2317 Gaps:19 100.00 2308 77.47 0.0 uncharacterized LOC103954620
blastp_kegg lcl|pop:POPTR_0003s22070g 1 2316 + 2316 Gaps:58 99.96 2265 78.18 0.0 POPTRDRAFT_758039 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1576930 1 2317 + 2317 Gaps:49 100.00 2278 77.17 0.0 hypothetical protein
blastp_kegg lcl|vvi:100253550 1 2317 + 2317 Gaps:30 100.00 2289 77.46 0.0 uncharacterized LOC100253550
blastp_pdb 3lnv_A 510 1079 + 570 Gaps:60 92.88 590 35.58 6e-82 mol:protein length:590 Saframycin Mx1 synthetase B
blastp_pdb 3kxw_A 510 1079 + 570 Gaps:60 92.88 590 35.58 6e-82 mol:protein length:590 Saframycin Mx1 synthetase B
blastp_pdb 3pbk_B 526 1071 + 546 Gaps:99 87.99 583 33.72 3e-54 mol:protein length:583 Fatty Acyl-Adenylate Ligase
blastp_pdb 3pbk_A 526 1071 + 546 Gaps:99 87.99 583 33.72 3e-54 mol:protein length:583 Fatty Acyl-Adenylate Ligase
blastp_pdb 3e53_A 554 952 + 399 Gaps:76 83.12 480 33.33 1e-43 mol:protein length:480 FATTY-ACID-CoA LIGASE FADD28
blastp_pdb 3t5a_A 554 952 + 399 Gaps:76 83.12 480 33.08 1e-42 mol:protein length:480 Long-chain-fatty-acid--AMP ligase FadD28
blastp_pdb 1u5u_B 1745 2055 + 311 Gaps:14 81.55 374 28.85 5e-24 mol:protein length:374 Allene oxide synthase-lipoxygenase protein
blastp_pdb 1u5u_A 1745 2055 + 311 Gaps:14 81.55 374 28.85 5e-24 mol:protein length:374 Allene oxide synthase-lipoxygenase protein
blastp_pdb 3dy5_C 1745 2055 + 311 Gaps:14 28.61 1066 28.85 5e-23 mol:protein length:1066 Allene oxide synthase-lipoxygenase protein
blastp_pdb 3dy5_A 1745 2055 + 311 Gaps:14 28.61 1066 28.85 5e-23 mol:protein length:1066 Allene oxide synthase-lipoxygenase protein
blastp_uniprot_sprot sp|B2HIM0|FAA28_MYCMM 554 1071 + 518 Gaps:99 87.76 580 35.17 2e-70 Long-chain-fatty-acid--AMP ligase FadD28 OS Mycobacterium marinum (strain ATCC BAA-535 / M) GN fadD28 PE 3 SV 1
blastp_uniprot_sprot sp|B2HIN2|FAA26_MYCMM 510 1077 + 568 Gaps:82 95.55 584 33.87 7e-69 Long-chain-fatty-acid--AMP ligase FadD26 OS Mycobacterium marinum (strain ATCC BAA-535 / M) GN fadD26 PE 3 SV 1
blastp_uniprot_sprot sp|B2HMK0|FAA32_MYCMM 487 1076 + 590 Gaps:79 95.87 629 32.67 8e-68 Long-chain-fatty-acid--AMP ligase FadD32 OS Mycobacterium marinum (strain ATCC BAA-535 / M) GN fadD32 PE 3 SV 1
blastp_uniprot_sprot sp|O53580|FAA32_MYCTU 487 1076 + 590 Gaps:89 94.66 637 32.50 3e-67 Long-chain-fatty-acid--AMP ligase FadD32 OS Mycobacterium tuberculosis GN fadD32 PE 1 SV 1
blastp_uniprot_sprot sp|Q7TTR2|FAA32_MYCBO 487 1076 + 590 Gaps:89 94.66 637 32.50 5e-67 Long-chain-fatty-acid--AMP ligase FadD32 OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN fadD32 PE 3 SV 1
blastp_uniprot_sprot sp|Q7TXM1|FAA26_MYCBO 510 1071 + 562 Gaps:101 94.51 583 33.21 2e-66 Long-chain-fatty-acid--AMP ligase FadD26 OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN fadD26 PE 1 SV 1
blastp_uniprot_sprot sp|Q10976|FAA26_MYCTU 510 1071 + 562 Gaps:91 94.51 583 33.94 2e-66 Long-chain-fatty-acid--AMP ligase FadD26 OS Mycobacterium tuberculosis GN fadD26 PE 1 SV 2
blastp_uniprot_sprot sp|Q7TXK5|FAA29_MYCBO 554 1072 + 519 Gaps:73 82.39 619 34.90 1e-65 Long-chain-fatty-acid--AMP ligase FadD29 OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN fadD29 PE 3 SV 1
blastp_uniprot_sprot sp|P95141|FAA29_MYCTU 554 1072 + 519 Gaps:73 82.39 619 34.90 1e-65 Long-chain-fatty-acid--AMP ligase FadD29 OS Mycobacterium tuberculosis GN fadD29 PE 1 SV 1
blastp_uniprot_sprot sp|B2HIL4|FAA29_MYCMM 554 1071 + 518 Gaps:87 81.83 622 34.97 2e-63 Long-chain-fatty-acid--AMP ligase FadD29 OS Mycobacterium marinum (strain ATCC BAA-535 / M) GN fadD29 PE 3 SV 1

48 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 1151 1166 16 PS00012 none Phosphopantetheine attachment site. IPR006162
Phobius 1230 1255 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 2135 2145 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 875 946 72 G3DSA:2.30.38.10 none none none
Phobius 1256 1274 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1470 1494 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 1343 1433 91 SSF51161 none none IPR011004
Pfam 1749 2020 272 PF00199 "KEGG:00380+1.11.1.6","KEGG:00630+1.11.1.6","MetaCyc:PWY-5506" Catalase IPR011614
Gene3D 1711 2065 355 G3DSA:2.40.180.10 "KEGG:00380+1.11.1.6","KEGG:00630+1.11.1.6","MetaCyc:PWY-5506" none IPR011614
Phobius 1303 1469 167 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1506 1531 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 681 692 12 PS00455 none Putative AMP-binding domain signature. IPR020845
Phobius 1559 2115 557 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 1127 1190 64 PF00550 none Phosphopantetheine attachment site IPR009081
Gene3D 2222 2311 90 G3DSA:2.160.10.10 none none none
Phobius 756 1229 474 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 1120 1214 95 G3DSA:1.10.1200.10 none none IPR009081
Phobius 2221 2317 97 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 731 731 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 526 959 434 PF00501 none AMP-binding enzyme IPR000873
Phobius 1538 1558 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 1578 1710 133 G3DSA:2.160.10.10 none none none
Phobius 1275 1302 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 508 1083 576 SSF56801 none none none
PANTHER 481 1076 596 PTHR22754 none none none
Phobius 1532 1537 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 2171 2202 32 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 47 60 14 PR00419 none Adrenodoxin reductase family signature none
PRINTS 23 45 23 PR00419 none Adrenodoxin reductase family signature none
Pfam 26 91 66 PF13450 none NAD(P)-binding Rossmann-like domain none

9 Localization

Analysis Start End Length
TMHMM 1508 1530 22
TMHMM 1537 1559 22
TMHMM 1281 1303 22
TMHMM 2114 2136 22
TMHMM 1231 1253 22
TMHMM 2143 2165 22
TMHMM 733 755 22
TMHMM 2195 2217 22
TMHMM 1471 1493 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting