Protein : Qrob_P0422460.2 Q. robur
Protein Identifier  ? Qrob_P0422460.2 Organism . Name  Quercus robur
Protein Description  (M=4) 2.3.1.119 - Icosanoyl-CoA synthase. Alias (in v1)  Qrob_P0530390.1
Code Enzyme  EC:2.3.1.199, EC:2.3.1.119 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 511  
Kegg Orthology  K15397
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0006633 fatty acid biosynthetic process The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
GO:0008610 lipid biosynthetic process The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100259490 1 510 + 510 Gaps:1 100.00 511 88.45 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|tcc:TCM_038359 1 510 + 510 Gaps:7 100.00 505 88.91 0.0 3-ketoacyl-CoA synthase
blastp_kegg lcl|cic:CICLE_v10008045mg 10 510 + 501 Gaps:1 98.24 511 88.65 0.0 hypothetical protein
blastp_kegg lcl|cit:102631264 10 510 + 501 Gaps:1 98.24 511 88.65 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|vvi:100266256 1 510 + 510 Gaps:1 100.00 511 85.91 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|cit:102609752 1 510 + 510 Gaps:2 100.00 512 85.35 0.0 3-ketoacyl-CoA synthase 11-like
blastp_kegg lcl|cic:CICLE_v10007916mg 1 510 + 510 Gaps:2 93.60 547 85.35 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s26530g 1 510 + 510 Gaps:1 99.80 512 85.71 0.0 POPTRDRAFT_561843 beta-ketoacyl-CoA synthase family protein
blastp_kegg lcl|tcc:TCM_037982 1 510 + 510 Gaps:4 100.00 514 85.41 0.0 3-ketoacyl-CoA synthase
blastp_kegg lcl|pop:POPTR_0018s01300g 1 510 + 510 Gaps:1 99.80 512 85.52 0.0 POPTRDRAFT_737124 hypothetical protein
blastp_pdb 1xet_D 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1xet_C 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1xet_B 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1xet_A 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1xes_D 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1xes_C 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1xes_B 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1xes_A 132 482 + 351 Gaps:74 83.54 413 27.54 1e-07 mol:protein length:413 Dihydropinosylvin synthase
blastp_pdb 1u0u_F 132 482 + 351 Gaps:74 86.90 397 27.54 1e-07 mol:protein length:397 Dihydropinosylvin synthase
blastp_pdb 1u0u_E 132 482 + 351 Gaps:74 86.90 397 27.54 1e-07 mol:protein length:397 Dihydropinosylvin synthase
blastp_uniprot_sprot sp|O48780|KCS11_ARATH 9 510 + 502 Gaps:2 98.62 509 81.08 0.0 3-ketoacyl-CoA synthase 11 OS Arabidopsis thaliana GN KCS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q5XEP9|KCS17_ARATH 13 510 + 498 Gaps:10 95.83 528 71.15 0.0 3-ketoacyl-CoA synthase 17 OS Arabidopsis thaliana GN KCS17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FG87|KCS19_ARATH 25 510 + 486 Gaps:7 93.19 529 72.62 0.0 3-ketoacyl-CoA synthase 19 OS Arabidopsis thaliana GN KCS19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LN49|KCS4_ARATH 16 504 + 489 none 94.77 516 69.33 0.0 3-ketoacyl-CoA synthase 4 OS Arabidopsis thaliana GN KCS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIX1|KCS9_ARATH 17 504 + 488 none 95.31 512 66.60 0.0 3-ketoacyl-CoA synthase 9 OS Arabidopsis thaliana GN KCS9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAM3|KCS1_ARATH 17 504 + 488 Gaps:7 93.75 528 64.85 0.0 3-ketoacyl-CoA synthase 1 OS Arabidopsis thaliana GN KCS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XF43|KCS6_ARATH 19 507 + 489 none 98.39 497 61.96 0.0 3-ketoacyl-CoA synthase 6 OS Arabidopsis thaliana GN CUT1 PE 1 SV 1
blastp_uniprot_sprot sp|O65677|KCS2_ARATH 30 504 + 475 Gaps:6 96.71 487 64.12 0.0 Probable 3-ketoacyl-CoA synthase 2 OS Arabidopsis thaliana GN KCS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C6L5|KCS5_ARATH 19 507 + 489 none 99.39 492 61.15 0.0 3-ketoacyl-CoA synthase 5 OS Arabidopsis thaliana GN KCS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q570B4|KCS10_ARATH 4 502 + 499 Gaps:36 95.82 550 54.46 0.0 3-ketoacyl-CoA synthase 10 OS Arabidopsis thaliana GN FDH PE 1 SV 2

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 56 74 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 310 483 174 G3DSA:3.40.47.10 none none IPR016038
Phobius 1 32 32 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 88 302 215 SSF53901 none none IPR016039
Pfam 94 382 289 PF08392 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" FAE1/Type III polyketide synthase-like protein IPR013601
SUPERFAMILY 311 481 171 SSF53901 none none IPR016039
Phobius 97 510 414 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PIRSF 21 510 490 PIRSF036417 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" none IPR012392
PANTHER 1 510 510 PTHR31561 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094";signature_desc=FAMILY NOT NAMED none IPR012392
PANTHER 1 510 510 PTHR31561:SF3 none none none
Phobius 33 55 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 95 300 206 G3DSA:3.40.47.10 none none IPR016038
Pfam 400 480 81 PF08541 "KEGG:00061+2.3.1.180","MetaCyc:PWY-4381","UniPathway:UPA00094" 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPR013747
Phobius 75 96 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 33 55 22
TMHMM 75 97 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting