Protein : Qrob_P0378940.2 Q. robur
Protein Identifier  ? Qrob_P0378940.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=8) K01177 - beta-amylase [EC:3.2.1.2] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 420  
Kegg Orthology  K01177
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0000272 polysaccharide catabolic process The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
GO:0016161 beta-amylase activity Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100254897 4 419 + 416 Gaps:15 81.42 522 76.71 0.0 inactive beta-amylase 4 chloroplastic-like
blastp_kegg lcl|mdm:103430089 1 419 + 419 Gaps:11 81.90 525 72.09 0.0 inactive beta-amylase 4 chloroplastic-like
blastp_kegg lcl|pxb:103946254 1 419 + 419 Gaps:12 81.94 526 71.93 0.0 inactive beta-amylase 4 chloroplastic-like
blastp_kegg lcl|pxb:103938271 1 419 + 419 Gaps:11 81.90 525 71.63 0.0 inactive beta-amylase 4 chloroplastic-like
blastp_kegg lcl|tcc:TCM_030645 37 418 + 382 Gaps:13 75.43 521 76.34 0.0 Beta-amylase 4
blastp_kegg lcl|pmum:103326703 4 419 + 416 Gaps:14 81.38 521 72.17 0.0 inactive beta-amylase 4 chloroplastic
blastp_kegg lcl|fve:101303481 1 419 + 419 Gaps:23 81.40 516 70.00 0.0 inactive beta-amylase 4 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa005450mg 66 419 + 354 Gaps:2 77.39 460 78.65 0.0 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10013225mg 37 418 + 382 Gaps:13 74.01 531 71.50 0.0 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_495656 37 418 + 382 Gaps:13 74.01 531 71.25 0.0 BMY6 beta-amylase 6
blastp_pdb 1wdr_A 75 419 + 345 Gaps:34 67.27 495 48.35 7e-92 mol:protein length:495 Beta-amylase
blastp_pdb 1q6d_A 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 beta-amylase
blastp_pdb 1uko_D 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_pdb 1uko_C 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_pdb 1uko_B 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_pdb 1uko_A 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_pdb 1ukp_D 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_pdb 1ukp_C 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_pdb 1ukp_B 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_pdb 1ukp_A 75 419 + 345 Gaps:34 67.27 495 48.05 1e-91 mol:protein length:495 Beta-amylase
blastp_uniprot_sprot sp|Q9FM68|BAM4_ARATH 38 418 + 381 Gaps:13 73.82 531 71.17 0.0 Inactive beta-amylase 4 chloroplastic OS Arabidopsis thaliana GN BAM4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LIR6|BAM1_ARATH 77 419 + 343 Gaps:19 58.09 575 48.50 1e-102 Beta-amylase 1 chloroplastic OS Arabidopsis thaliana GN BAM1 PE 1 SV 1
blastp_uniprot_sprot sp|O23553|BAM3_ARATH 77 419 + 343 Gaps:16 60.77 548 48.65 2e-102 Beta-amylase 3 chloroplastic OS Arabidopsis thaliana GN BAM3 PE 1 SV 3
blastp_uniprot_sprot sp|P25853|BAM5_ARATH 75 412 + 338 Gaps:37 65.66 498 49.85 5e-92 Beta-amylase 5 OS Arabidopsis thaliana GN BAM5 PE 2 SV 1
blastp_uniprot_sprot sp|O22585|AMYB_MEDSA 75 419 + 345 Gaps:34 67.14 496 48.05 2e-91 Beta-amylase OS Medicago sativa GN BMY1 PE 1 SV 1
blastp_uniprot_sprot sp|O65258|BAM2_ARATH 77 419 + 343 Gaps:25 60.89 542 49.39 5e-91 Beta-amylase 2 chloroplastic OS Arabidopsis thaliana GN BAM2 PE 1 SV 2
blastp_uniprot_sprot sp|P10538|AMYB_SOYBN 75 419 + 345 Gaps:34 67.14 496 48.05 1e-90 Beta-amylase OS Glycine max GN BMY1 PE 1 SV 3
blastp_uniprot_sprot sp|O64407|AMYB_VIGUN 75 419 + 345 Gaps:34 67.14 496 48.35 2e-89 Beta-amylase OS Vigna unguiculata GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|P82993|AMYB_HORVS 73 419 + 347 Gaps:26 62.62 535 48.66 2e-89 Beta-amylase OS Hordeum vulgare subsp. spontaneum GN BMY1 PE 1 SV 1
blastp_uniprot_sprot sp|P16098|AMYB_HORVU 73 419 + 347 Gaps:26 62.62 535 48.66 4e-89 Beta-amylase OS Hordeum vulgare GN BMY1 PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 72 418 347 G3DSA:3.20.20.80 none none IPR013781
PANTHER 66 419 354 PTHR31352 none none none
PANTHER 66 419 354 PTHR31352:SF1 none none none
SUPERFAMILY 74 418 345 SSF51445 none none IPR017853
PRINTS 115 129 15 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 136 154 19 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 367 383 17 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 384 395 12 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 402 419 18 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 251 273 23 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
Pfam 98 415 318 PF01373 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Glycosyl hydrolase family 14 IPR001554

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting