Protein : Qrob_P0372300.2 Q. robur
Protein Identifier  ? Qrob_P0372300.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11654:SF82 - PROTEIN NRT1/ PTR FAMILY 5.8-RELATED (PTHR11654:SF82) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 430  
Kegg Orthology  K14638
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0007186 G-protein coupled receptor signaling pathway A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576).
GO:0004932 mating-type factor pheromone receptor activity Combining with a mating-type factor pheromone to initiate a change in cell activity.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_018029 2 429 + 428 Gaps:5 79.30 541 74.36 0.0 Amino acid permease putative isoform 1
blastp_kegg lcl|pmum:103329927 2 429 + 428 Gaps:4 79.34 542 70.70 0.0 protein NRT1/ PTR FAMILY 5.8
blastp_kegg lcl|pper:PRUPE_ppa003862mg 2 429 + 428 Gaps:5 79.37 543 69.84 0.0 hypothetical protein
blastp_kegg lcl|mdm:103404375 2 429 + 428 Gaps:5 79.37 543 70.07 0.0 protein NRT1/ PTR FAMILY 5.8
blastp_kegg lcl|pxb:103928453 2 429 + 428 Gaps:5 79.37 543 69.14 0.0 protein NRT1/ PTR FAMILY 5.8-like
blastp_kegg lcl|rcu:RCOM_0852710 2 429 + 428 Gaps:5 79.29 536 69.18 0.0 amino acid permease putative
blastp_kegg lcl|vvi:100853271 3 427 + 425 Gaps:9 78.80 533 70.00 0.0 probable peptide/nitrate transporter At5g14940-like
blastp_kegg lcl|mdm:103411043 2 429 + 428 Gaps:5 79.37 543 70.07 0.0 protein NRT1/ PTR FAMILY 5.8-like
blastp_kegg lcl|pop:POPTR_0017s03380g 1 427 + 427 Gaps:6 79.81 540 71.00 0.0 proton-dependent oligopeptide transport family protein
blastp_kegg lcl|mdm:103411346 2 429 + 428 Gaps:5 79.37 543 69.61 0.0 protein NRT1/ PTR FAMILY 5.8-like
blastp_pdb 2xut_C 7 360 + 354 Gaps:46 65.27 524 23.98 2e-13 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_pdb 2xut_B 7 360 + 354 Gaps:46 65.27 524 23.98 2e-13 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_pdb 2xut_A 7 360 + 354 Gaps:46 65.27 524 23.98 2e-13 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_uniprot_sprot sp|Q9LFR1|PTR50_ARATH 5 428 + 424 Gaps:24 79.35 552 59.82 1e-174 Protein NRT1/ PTR FAMILY 5.8 OS Arabidopsis thaliana GN NPF5.8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SRI2|PTR31_ARATH 1 427 + 427 Gaps:21 79.57 563 60.04 9e-167 Protein NRT1/ PTR FAMILY 5.9 OS Arabidopsis thaliana GN NPF5.9 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WP01|PTR9_ARATH 7 420 + 414 Gaps:33 72.71 557 45.19 2e-113 Protein NRT1/ PTR FAMILY 5.10 OS Arabidopsis thaliana GN NPF5.10 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WSZ6|PTR23_ARATH 3 420 + 418 Gaps:33 75.04 561 43.71 3e-111 Protein NRT1/ PTR FAMILY 5.13 OS Arabidopsis thaliana GN NPF5.13 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VZE2|PTR22_ARATH 7 420 + 414 Gaps:19 73.43 557 44.01 2e-110 Protein NRT1/ PTR FAMILY 5.14 OS Arabidopsis thaliana GN NPF5.14 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C7U1|PTR25_ARATH 7 418 + 412 Gaps:37 71.89 555 44.11 2e-104 Protein NRT1/ PTR FAMILY 5.12 OS Arabidopsis thaliana GN NPF5.12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SK96|PTR10_ARATH 7 420 + 414 Gaps:21 72.16 564 40.79 6e-103 Protein NRT1/ PTR FAMILY 5.16 OS Arabidopsis thaliana GN NPF5.16 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RX67|PTR24_ARATH 1 418 + 418 Gaps:19 74.54 538 40.90 1e-102 Protein NRT1/ PTR FAMILY 5.11 OS Arabidopsis thaliana GN NPF5.11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SK99|PTR11_ARATH 3 420 + 418 Gaps:19 73.45 565 38.31 2e-91 Protein NRT1/ PTR FAMILY 5.15 OS Arabidopsis thaliana GN NPF5.15 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M1I2|PTR46_ARATH 1 420 + 420 Gaps:37 77.66 555 35.27 6e-91 Protein NRT1/ PTR FAMILY 5.4 OS Arabidopsis thaliana GN NPF5.4 PE 2 SV 1
rpsblast_cdd gnl|CDD|144446 4 356 + 353 Gaps:27 91.40 372 29.71 3e-42 pfam00854 PTR2 POT family. The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.
rpsblast_cdd gnl|CDD|162112 7 292 + 286 Gaps:46 39.14 654 26.95 4e-17 TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics the antitumor agent bestatin and various protease inhibitors).
rpsblast_cdd gnl|CDD|32918 2 382 + 381 Gaps:55 71.08 498 19.21 2e-15 COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism].
rpsblast_kog gnl|CDD|36451 5 422 + 418 Gaps:31 72.68 571 38.31 4e-95 KOG1237 KOG1237 KOG1237 H+/oligopeptide symporter [Amino acid transport and metabolism].

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 4 355 352 PF00854 "Reactome:REACT_15518","Reactome:REACT_19419" POT family IPR000109
Phobius 338 348 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 230 337 108 PF02076 none Pheromone A receptor IPR001499
Phobius 265 286 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 395 413 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 56 75 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 349 375 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 102 183 82 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 376 394 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 184 205 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 427 427 PTHR11654 "Reactome:REACT_15518","Reactome:REACT_19419";signature_desc=OLIGOPEPTIDE TRANSPORTER-RELATED none IPR000109
Gene3D 13 100 88 G3DSA:1.20.1250.20 none none none
Phobius 318 337 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 55 55 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 246 264 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 206 224 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 76 80 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 427 427 PTHR11654:SF82 none none none
Phobius 225 245 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 6 111 106 SSF103473 none none IPR020846
SUPERFAMILY 165 417 253 SSF103473 none none IPR020846
Phobius 81 101 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 414 429 16 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 287 317 31 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

9 Localization

Analysis Start End Length
TMHMM 79 101 22
TMHMM 395 414 19
TMHMM 351 373 22
TMHMM 234 256 22
SignalP_EUK 1 18 17
TMHMM 53 75 22
TMHMM 309 331 22
TMHMM 184 206 22
TMHMM 269 286 17

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting