Protein : Qrob_P0313540.2 Q. robur
Protein Identifier  ? Qrob_P0313540.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG1418//KOG1419//KOG1420//KOG1545//KOG3713//KOG4390//KOG4404 - Tandem pore domain K+ channel [Inorganic ion transport and metabolism]. // Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]. // Ca2+-activated K+ channel Slowpoke alpha subunit [Inorganic ion transport and metabolism Signal transduction mechanisms]. // Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]. // Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]. // Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]. // Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 347  
Kegg Orthology  K05389
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006813 potassium ion transport The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005774 vacuolar membrane The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
GO:0071805 potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.
GO:0005249 voltage-gated potassium channel activity Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO:0030007 cellular potassium ion homeostasis Any process involved in the maintenance of an internal steady state of potassium ions at the level of a cell.
GO:0005267 potassium channel activity Enables the selective, facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103342723 1 341 + 341 Gaps:10 97.46 354 52.17 3e-112 two-pore potassium channel 1-like
blastp_kegg lcl|pper:PRUPE_ppa026042mg 1 341 + 341 Gaps:10 97.46 354 50.72 5e-109 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa008303mg 32 341 + 310 Gaps:2 91.99 337 54.84 5e-109 hypothetical protein
blastp_kegg lcl|vvi:100246381 17 346 + 330 Gaps:10 95.48 354 51.48 3e-106 calcium-activated outward-rectifying potassium channel 1-like
blastp_kegg lcl|vvi:100263526 4 340 + 337 Gaps:16 98.00 350 48.69 3e-105 calcium-activated outward-rectifying potassium channel 1-like
blastp_kegg lcl|mdm:103407916 6 345 + 340 Gaps:9 98.01 352 50.14 3e-105 two-pore potassium channel 1-like
blastp_kegg lcl|mdm:103427513 6 345 + 340 Gaps:9 98.01 352 50.14 8e-105 two-pore potassium channel 1-like
blastp_kegg lcl|pmum:103342722 32 341 + 310 Gaps:2 91.99 337 54.19 6e-103 two-pore potassium channel 1
blastp_kegg lcl|pxb:103965434 1 345 + 345 Gaps:12 98.58 352 49.28 1e-102 two-pore potassium channel 1-like
blastp_kegg lcl|pop:POPTR_0008s00520g 1 345 + 345 Gaps:14 99.15 354 49.00 2e-100 POPTRDRAFT_803058 pulvinus outward-rectifying channel for potassium SPOCK1 family protein
blastp_pdb 3ouf_B 97 246 + 150 none 68.04 97 53.03 7e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3ouf_A 97 246 + 150 none 68.04 97 53.03 7e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_B 97 246 + 150 none 68.04 97 51.52 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_A 97 246 + 150 none 68.04 97 51.52 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t1c_B 97 246 + 150 none 68.04 97 51.52 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t1c_A 97 246 + 150 none 68.04 97 51.52 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_B 97 246 + 150 none 68.04 97 51.52 3e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_A 97 246 + 150 none 68.04 97 51.52 3e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4d_B 97 246 + 150 none 68.04 97 51.52 3e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4d_A 97 246 + 150 none 68.04 97 51.52 3e-07 mol:protein length:97 Potassium channel protein
blastp_uniprot_sprot sp|Q8LBL1|KCO1_ARATH 49 341 + 293 Gaps:2 80.72 363 50.51 1e-93 Two-pore potassium channel 1 OS Arabidopsis thaliana GN TPK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q850M0|KCO1_ORYSJ 29 345 + 317 Gaps:9 90.49 347 43.63 8e-78 Two pore potassium channel a OS Oryza sativa subsp. japonica GN TPKA PE 1 SV 1
blastp_uniprot_sprot sp|Q8LIN5|KCO2_ORYSJ 78 340 + 263 Gaps:7 73.35 349 46.48 7e-75 Two pore potassium channel b OS Oryza sativa subsp. japonica GN TPKB PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVV6|KCO6_ARATH 69 342 + 274 Gaps:2 63.30 436 34.06 1e-50 Two-pore potassium channel 3 OS Arabidopsis thaliana GN TPK3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL25|KCO2_ARATH 69 344 + 276 Gaps:8 63.66 443 33.69 1e-48 Two-pore potassium channel 2 OS Arabidopsis thaliana GN TPK2 PE 2 SV 1
blastp_uniprot_sprot sp|Q69TN4|KCO3_ORYSJ 63 345 + 283 Gaps:8 63.38 456 37.02 8e-48 Two pore potassium channel c OS Oryza sativa subsp. japonica GN TPKC PE 3 SV 1
blastp_uniprot_sprot sp|Q9S6Z8|KCO5_ARATH 72 341 + 270 Gaps:9 68.38 408 36.20 2e-47 Two-pore potassium channel 5 OS Arabidopsis thaliana GN TPK5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FWX6|KCO4_ARATH 58 328 + 271 Gaps:24 87.68 284 37.35 3e-39 Two-pore potassium channel 4 OS Arabidopsis thaliana GN TPK4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9XFR0|KCO3_ARATH 188 344 + 157 none 60.38 260 32.48 3e-21 Potassium inward rectifier (Kir)-like channel 3 OS Arabidopsis thaliana GN KCO3 PE 1 SV 1
blastp_uniprot_sprot sp|P40310|TOK1_YEAST 51 262 + 212 Gaps:30 32.42 691 28.57 2e-16 Outward-rectifier potassium channel TOK1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TOK1 PE 1 SV 1

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 96 340 245 PTHR11003 none none none
Phobius 121 141 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 184 264 81 G3DSA:1.10.287.70 none none none
PRINTS 62 85 24 PR00169 none Potassium channel signature IPR003091
PRINTS 93 115 23 PR00169 none Potassium channel signature IPR003091
PRINTS 122 148 27 PR00169 none Potassium channel signature IPR003091
Phobius 206 210 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 265 342 78 G3DSA:1.10.238.10 none none IPR011992
Gene3D 54 152 99 G3DSA:1.10.287.70 none none none
Phobius 185 205 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 328 340 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Pfam 69 149 81 PF07885 none Ion channel IPR013099
Pfam 191 264 74 PF07885 none Ion channel IPR013099
Phobius 239 259 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 211 227 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 182 281 100 SSF81324 none none none
SUPERFAMILY 53 152 100 SSF81324 none none none
Phobius 63 84 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 223 232 10 PR01333 none Two pore domain K+ channel signature IPR003280
PRINTS 105 133 29 PR01333 none Two pore domain K+ channel signature IPR003280
Phobius 116 120 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 277 342 66 SSF47473 none none none
Phobius 85 95 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 62 62 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 260 346 87 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 96 340 245 PTHR11003:SF88 none none IPR031144
Phobius 96 115 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 289 301 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Phobius 142 184 43 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 228 238 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

6 Localization

Analysis Start End Length
TMHMM 62 84 22
TMHMM 97 116 19
TMHMM 211 228 17
TMHMM 240 262 22
TMHMM 185 207 22
TMHMM 120 142 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting