Protein : Qrob_P0313530.2 Q. robur
Protein Identifier  ? Qrob_P0313530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) KOG1418//KOG1419//KOG1420//KOG3713//KOG4404 - Tandem pore domain K+ channel [Inorganic ion transport and metabolism]. // Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]. // Ca2+-activated K+ channel Slowpoke alpha subunit [Inorganic ion transport and metabolism Signal transduction mechanisms]. // Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]. // Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 340  
Kegg Orthology  K05389
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006813 potassium ion transport The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005774 vacuolar membrane The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
GO:0071805 potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.
GO:0005249 voltage-gated potassium channel activity Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO:0030007 cellular potassium ion homeostasis Any process involved in the maintenance of an internal steady state of potassium ions at the level of a cell.
GO:0005267 potassium channel activity Enables the selective, facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008303mg 33 332 + 300 Gaps:16 93.18 337 52.55 1e-100 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa026042mg 20 332 + 313 Gaps:17 92.66 354 50.00 2e-99 hypothetical protein
blastp_kegg lcl|pmum:103342723 20 332 + 313 Gaps:17 92.66 354 50.00 5e-99 two-pore potassium channel 1-like
blastp_kegg lcl|vvi:100246381 15 331 + 317 Gaps:17 93.79 354 49.10 7e-99 calcium-activated outward-rectifying potassium channel 1-like
blastp_kegg lcl|pxb:103965434 1 336 + 336 Gaps:21 98.58 352 48.99 6e-98 two-pore potassium channel 1-like
blastp_kegg lcl|mdm:103407916 24 336 + 313 Gaps:18 92.90 352 50.46 3e-97 two-pore potassium channel 1-like
blastp_kegg lcl|mdm:103427513 24 336 + 313 Gaps:18 92.90 352 50.46 7e-97 two-pore potassium channel 1-like
blastp_kegg lcl|vvi:100263526 15 331 + 317 Gaps:31 94.86 350 48.49 2e-96 calcium-activated outward-rectifying potassium channel 1-like
blastp_kegg lcl|pmum:103342722 33 332 + 300 Gaps:28 93.18 337 53.18 5e-96 two-pore potassium channel 1
blastp_kegg lcl|pxb:103946258 1 334 + 334 Gaps:21 99.71 346 48.99 6e-95 two-pore potassium channel 1-like
blastp_pdb 3ouf_B 103 266 + 164 Gaps:3 79.38 97 51.95 1e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3ouf_A 103 266 + 164 Gaps:3 79.38 97 51.95 1e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4z_B 74 266 + 193 Gaps:14 79.38 97 51.95 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4z_A 74 266 + 193 Gaps:14 79.38 97 51.95 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_B 74 266 + 193 Gaps:14 79.38 97 51.95 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_A 74 266 + 193 Gaps:14 79.38 97 51.95 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3t1c_B 74 266 + 193 Gaps:14 79.38 97 51.95 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3t1c_A 74 266 + 193 Gaps:14 79.38 97 51.95 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_B 103 266 + 164 Gaps:3 79.38 97 50.65 5e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_A 103 266 + 164 Gaps:3 79.38 97 50.65 5e-08 mol:protein length:97 Potassium channel protein
blastp_uniprot_sprot sp|Q8LBL1|KCO1_ARATH 54 332 + 279 Gaps:16 80.72 363 49.83 2e-88 Two-pore potassium channel 1 OS Arabidopsis thaliana GN TPK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q850M0|KCO1_ORYSJ 18 331 + 314 Gaps:39 97.12 347 42.14 5e-73 Two pore potassium channel a OS Oryza sativa subsp. japonica GN TPKA PE 1 SV 1
blastp_uniprot_sprot sp|Q8LIN5|KCO2_ORYSJ 84 331 + 248 Gaps:22 73.35 349 44.92 3e-66 Two pore potassium channel b OS Oryza sativa subsp. japonica GN TPKB PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVV6|KCO6_ARATH 75 333 + 259 Gaps:17 63.30 436 33.70 3e-47 Two-pore potassium channel 3 OS Arabidopsis thaliana GN TPK3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL25|KCO2_ARATH 29 335 + 307 Gaps:24 73.36 443 31.69 3e-45 Two-pore potassium channel 2 OS Arabidopsis thaliana GN TPK2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S6Z8|KCO5_ARATH 53 332 + 280 Gaps:31 72.79 408 33.67 3e-43 Two-pore potassium channel 5 OS Arabidopsis thaliana GN TPK5 PE 1 SV 1
blastp_uniprot_sprot sp|Q69TN4|KCO3_ORYSJ 74 336 + 263 Gaps:22 62.06 456 36.04 2e-42 Two pore potassium channel c OS Oryza sativa subsp. japonica GN TPKC PE 3 SV 1
blastp_uniprot_sprot sp|Q9FWX6|KCO4_ARATH 53 319 + 267 Gaps:19 92.25 284 37.02 6e-42 Two-pore potassium channel 4 OS Arabidopsis thaliana GN TPK4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9XFR0|KCO3_ARATH 178 335 + 158 Gaps:22 63.85 260 29.52 2e-16 Potassium inward rectifier (Kir)-like channel 3 OS Arabidopsis thaliana GN KCO3 PE 1 SV 1
blastp_uniprot_sprot sp|P40310|TOK1_YEAST 65 254 + 190 Gaps:30 29.23 691 28.22 3e-12 Outward-rectifier potassium channel TOK1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TOK1 PE 1 SV 1

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 273 333 61 SSF47473 none none none
Phobius 91 101 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 280 292 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Phobius 264 339 76 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 183 259 77 SSF81324 none none none
Phobius 245 263 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 127 147 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 276 331 56 G3DSA:1.10.238.10 none none IPR011992
PANTHER 102 331 230 PTHR11003:SF88 none none IPR031144
Pfam 74 154 81 PF07885 none Ion channel IPR013099
Pfam 197 254 58 PF07885 none Ion channel IPR013099
SUPERFAMILY 63 158 96 SSF81324 none none none
ProSitePatterns 319 331 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Phobius 234 244 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 102 331 230 PTHR11003 none none none
PRINTS 111 139 29 PR01333 none Two pore domain K+ channel signature IPR003280
PRINTS 229 238 10 PR01333 none Two pore domain K+ channel signature IPR003280
Phobius 69 90 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 212 216 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 128 154 27 PR00169 none Potassium channel signature IPR003091
PRINTS 99 121 23 PR00169 none Potassium channel signature IPR003091
PRINTS 68 91 24 PR00169 none Potassium channel signature IPR003091
Phobius 217 233 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 68 68 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 122 126 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 148 190 43 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 183 259 77 G3DSA:1.10.287.70 none none none
Gene3D 65 157 93 G3DSA:1.10.287.70 none none none
Phobius 191 211 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 102 121 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 68 90 22
TMHMM 126 148 22
TMHMM 191 213 22
TMHMM 245 263 18
TMHMM 103 122 19

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting