Protein : Qrob_P0297780.2 Q. robur
Protein Identifier  ? Qrob_P0297780.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR11785//PTHR11785:SF205 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 484  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103954037 26 459 + 434 none 94.55 459 78.80 0.0 probable polyamine transporter At3g13620
blastp_kegg lcl|mdm:103422556 26 459 + 434 none 92.74 468 78.57 0.0 probable polyamine transporter At3g13620
blastp_kegg lcl|rcu:RCOM_0878760 1 458 + 458 none 98.49 465 74.89 0.0 amino acid transporter putative
blastp_kegg lcl|fve:101304657 27 459 + 433 none 92.52 468 78.06 0.0 probable polyamine transporter At3g13620-like
blastp_kegg lcl|pmum:103335227 26 458 + 433 none 89.65 483 77.83 0.0 probable polyamine transporter At3g13620
blastp_kegg lcl|gmx:100812773 9 481 + 473 Gaps:2 97.92 481 71.76 0.0 probable polyamine transporter At3g13620-like
blastp_kegg lcl|sly:101243629 5 458 + 454 Gaps:1 95.37 475 74.61 0.0 probable polyamine transporter At3g13620-like
blastp_kegg lcl|mdm:103447006 26 459 + 434 none 92.74 468 77.19 0.0 probable polyamine transporter At3g13620
blastp_kegg lcl|sot:102603417 28 467 + 440 none 93.02 473 74.09 0.0 probable polyamine transporter At3g13620-like
blastp_kegg lcl|pper:PRUPE_ppa005207mg 26 458 + 433 none 91.74 472 77.14 0.0 hypothetical protein
blastp_pdb 3ncy_D 25 348 + 324 Gaps:35 73.03 445 25.23 2e-10 mol:protein length:445 AdiC
blastp_pdb 3ncy_C 25 348 + 324 Gaps:35 73.03 445 25.23 2e-10 mol:protein length:445 AdiC
blastp_pdb 3ncy_B 25 348 + 324 Gaps:35 73.03 445 25.23 2e-10 mol:protein length:445 AdiC
blastp_pdb 3ncy_A 25 348 + 324 Gaps:35 73.03 445 25.23 2e-10 mol:protein length:445 AdiC
blastp_pdb 3ob6_B 26 348 + 323 Gaps:35 72.81 445 24.38 5e-09 mol:protein length:445 AdiC arginine:agmatine antiporter
blastp_pdb 3ob6_A 26 348 + 323 Gaps:35 72.81 445 24.38 5e-09 mol:protein length:445 AdiC arginine:agmatine antiporter
blastp_pdb 3lrc_D 26 348 + 323 Gaps:35 72.81 445 24.38 8e-09 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_C 26 348 + 323 Gaps:35 72.81 445 24.38 8e-09 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_B 26 348 + 323 Gaps:35 72.81 445 24.38 8e-09 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_A 26 348 + 323 Gaps:35 72.81 445 24.38 8e-09 mol:protein length:445 Arginine/agmatine antiporter
blastp_uniprot_sprot sp|Q9LHN7|PHSC_ARATH 9 481 + 473 Gaps:7 97.49 478 66.95 0.0 Probable polyamine transporter At3g13620 OS Arabidopsis thaliana GN At3g13620 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFL1|RMV1_ARATH 12 462 + 451 Gaps:1 91.84 490 46.44 1e-142 Polyamine transporter RMV1 OS Arabidopsis thaliana GN RMV1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C6S5|PHSB_ARATH 18 462 + 445 Gaps:3 89.29 495 45.25 1e-139 Probable polyamine transporter At1g31830 OS Arabidopsis thaliana GN At1g31830 PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z8D0|PUT1_ORYSJ 25 458 + 434 Gaps:3 81.17 531 48.72 2e-137 Polyamine transporter PUT1 OS Oryza sativa subsp. japonica GN PUT1 PE 1 SV 1
blastp_uniprot_sprot sp|A2X8M8|PUT1_ORYSI 25 458 + 434 Gaps:3 81.17 531 48.72 2e-137 Polyamine transporter PUT1 OS Oryza sativa subsp. indica GN PUT1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LH39|PHSD_ARATH 14 457 + 444 Gaps:5 92.48 479 47.63 4e-135 Probable polyamine transporter At3g19553 OS Arabidopsis thaliana GN At3g19553 PE 3 SV 1
blastp_uniprot_sprot sp|Q9C6S4|PHSA_ARATH 25 459 + 435 Gaps:11 89.63 482 46.99 8e-131 Probable polyamine transporter At1g31820 OS Arabidopsis thaliana GN At1g31820 PE 3 SV 1
blastp_uniprot_sprot sp|O34739|STET_BACSU 72 451 + 380 Gaps:36 87.21 438 24.08 3e-13 Serine/threonine exchanger SteT OS Bacillus subtilis (strain 168) GN steT PE 1 SV 1
blastp_uniprot_sprot sp|Q9WTR6|XCT_MOUSE 78 456 + 379 Gaps:36 76.69 502 24.42 9e-11 Cystine/glutamate transporter OS Mus musculus GN Slc7a11 PE 1 SV 1
blastp_uniprot_sprot sp|P37034|Y1691_LEGPH 59 400 + 342 Gaps:40 79.31 464 26.63 6e-10 Uncharacterized transporter lpg1691 OS Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN lpg1691 PE 3 SV 2

27 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 192 244 53 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 271 289 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 424 428 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 386 404 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 133 143 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 245 270 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 144 162 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 429 446 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 456 456 PTHR11785 none none IPR002293
Phobius 405 423 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 364 385 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 163 167 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 359 363 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 168 191 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 338 358 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 456 456 PTHR11785:SF205 none none none
Phobius 113 132 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 50 55 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 53 426 374 PF13520 none Amino acid permease IPR002293
Phobius 30 49 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 447 483 37 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 290 308 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PIRSF 11 470 460 PIRSF006060 none none IPR002293
Phobius 309 337 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 29 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 76 112 37 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 56 75 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

8 Localization

Analysis Start End Length
TMHMM 246 268 22
TMHMM 53 75 22
TMHMM 403 425 22
TMHMM 143 165 22
TMHMM 30 49 19
TMHMM 169 191 22
TMHMM 429 446 17
TMHMM 364 386 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 45   Secretory pathway 5 0.770 0.030 NON-PLANT 45