Protein : Qrob_P0267980.2 Q. robur
Protein Identifier  ? Qrob_P0267980.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR11040:SF41 - ZINC TRANSPORTER 7 (PTHR11040:SF41) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 352  
Kegg Orthology  K14709
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046873 metal ion transmembrane transporter activity Enables the transfer of metal ions from one side of a membrane to the other.
GO:0005385 zinc ion transmembrane transporter activity Enables the transfer of zinc (Zn) ions from one side of a membrane to the other.
GO:0071577 zinc II ion transmembrane transport A process in which a zinc II ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103341992 6 351 + 346 Gaps:16 99.17 361 62.85 1e-151 fe(2+) transport protein 1-like
blastp_kegg lcl|rcu:RCOM_1465180 14 351 + 338 Gaps:5 96.01 351 65.88 7e-151 zinc/iron transporter putative (EC:1.3.1.74)
blastp_kegg lcl|pper:PRUPE_ppa020099mg 6 351 + 346 Gaps:16 99.17 361 62.57 7e-150 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s14430g 3 351 + 349 Gaps:13 99.72 359 63.69 1e-149 POPTRDRAFT_225741 zinc transporter 7 precursor family protein
blastp_kegg lcl|pxb:103966116 6 351 + 346 Gaps:28 99.44 354 61.36 2e-148 fe(2+) transport protein 1-like
blastp_kegg lcl|mdm:103452301 19 351 + 333 Gaps:11 95.73 351 63.99 2e-146 fe(2+) transport protein 1-like
blastp_kegg lcl|cmo:103484506 25 351 + 327 Gaps:2 93.66 347 63.69 3e-146 fe(2+) transport protein 1-like
blastp_kegg lcl|cit:102630780 19 351 + 333 Gaps:6 94.24 347 62.69 2e-143 fe(2+) transport protein 1-like
blastp_kegg lcl|atr:s00032p00184330 7 351 + 345 Gaps:7 97.70 348 63.53 1e-142 AMTR_s00032p00184330 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10033475mg 20 351 + 332 Gaps:12 93.95 347 63.19 2e-142 hypothetical protein
blastp_uniprot_sprot sp|Q75HB1|IRT1_ORYSJ 40 351 + 312 Gaps:15 86.36 374 61.61 6e-133 Fe(2+) transport protein 1 OS Oryza sativa subsp. japonica GN IRT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6L8G1|IRT2_ORYSJ 40 351 + 312 Gaps:14 88.11 370 60.12 5e-131 Fe(2+) transport protein 2 OS Oryza sativa subsp. japonica GN IRT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W246|ZIP7_ARATH 15 351 + 337 Gaps:14 96.16 365 55.27 1e-125 Zinc transporter 7 OS Arabidopsis thaliana GN ZIP7 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S3W4|ZIP8_ARATH 1 351 + 351 Gaps:6 100.00 347 56.20 3e-123 Probable zinc transporter 8 OS Arabidopsis thaliana GN ZIP8 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W245|ZIP10_ARATH 6 351 + 346 Gaps:17 99.73 364 51.52 2e-120 Probable zinc transporter 10 OS Arabidopsis thaliana GN ZIP10 PE 1 SV 2
blastp_uniprot_sprot sp|Q38856|IRT1_ARATH 12 351 + 340 Gaps:7 96.54 347 54.63 1e-116 Fe(2+) transport protein 1 OS Arabidopsis thaliana GN IRT1 PE 1 SV 2
blastp_uniprot_sprot sp|O81850|IRT2_ARATH 12 351 + 340 Gaps:7 98.00 350 50.44 1e-107 Fe(2+) transport protein 2 OS Arabidopsis thaliana GN IRT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6L8G0|ZIP5_ORYSJ 12 351 + 340 Gaps:6 96.88 353 46.20 3e-96 Zinc transporter 5 OS Oryza sativa subsp. japonica GN ZIP5 PE 2 SV 1
blastp_uniprot_sprot sp|O81123|ZIP1_ARATH 30 351 + 322 Gaps:12 91.83 355 48.77 1e-93 Zinc transporter 1 OS Arabidopsis thaliana GN ZIP1 PE 2 SV 1
blastp_uniprot_sprot sp|O23039|ZIP5_ARATH 25 351 + 327 Gaps:14 93.61 360 48.37 4e-93 Zinc transporter 5 OS Arabidopsis thaliana GN ZIP5 PE 2 SV 1
rpsblast_cdd gnl|CDD|162055 32 351 + 320 Gaps:4 100.00 324 52.78 1e-109 TIGR00820 zip ZIP zinc/iron transport family. The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals plants and yeast. Theycomprise a diverse family with several paralogues in any one organism (e.g. at least five in Caenorabditis elegans at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins Zrt1 and Zrt2 both probably transport Zn2+ with high specificity but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+ and at least one transports a range of metal ions. The energy source fortransport has not been characterized but these systems probably function as secondary carriers.
rpsblast_cdd gnl|CDD|177818 11 351 + 341 Gaps:16 98.22 337 56.19 8e-98 PLN02159 PLN02159 Fe(2+) transport protein.
rpsblast_cdd gnl|CDD|202272 47 348 + 302 Gaps:20 100.00 314 34.71 9e-53 pfam02535 Zip ZIP Zinc transporter. The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product although this protein in not found within this family.
rpsblast_kog gnl|CDD|36771 35 351 + 317 Gaps:11 99.08 327 44.14 3e-71 KOG1558 KOG1558 KOG1558 Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism].

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 23 27 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 250 260 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 261 283 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 218 228 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 316 326 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 11 351 341 PTHR11040:SF41 none none none
Pfam 48 348 301 PF02535 none ZIP Zinc transporter IPR003689
Phobius 284 288 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 197 217 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 146 196 51 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 327 348 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 229 249 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 349 351 3 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 289 315 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 105 123 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 83 104 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 28 50 23 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 72 82 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 27 27 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 51 71 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
TIGRFAM 32 351 320 TIGR00820 none zip: ZIP zinc/iron transport family IPR004698
Phobius 10 22 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 124 145 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 11 351 341 PTHR11040 none none none

11 Localization

Analysis Start End Length
TMHMM 289 311 22
TMHMM 260 282 22
TMHMM 49 71 22
SignalP_GRAM_POSITIVE 1 27 26
SignalP_EUK 1 27 26
TMHMM 10 27 17
TMHMM 326 348 22
TMHMM 86 104 18
TMHMM 228 250 22
TMHMM 197 219 22
TMHMM 124 146 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.994 0.032 NON-PLANT 27