Protein : Qrob_P0248150.2 Q. robur
Protein Identifier  ? Qrob_P0248150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0161//KOG0996 - Myosin class II heavy chain [Cytoskeleton]. // Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 683  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0031047 gene silencing by RNA Any process in which RNA molecules inactivate expression of target genes.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s19220g 4 681 + 678 Gaps:33 99.26 676 59.61 0.0 XH/XS domain-containing family protein
blastp_kegg lcl|cit:102620954 8 682 + 675 Gaps:56 98.57 630 61.67 0.0 myosin-2 heavy chain-like
blastp_kegg lcl|cic:CICLE_v10029911mg 8 682 + 675 Gaps:56 84.84 732 61.67 0.0 hypothetical protein
blastp_kegg lcl|pxb:103944909 6 682 + 677 Gaps:45 97.57 699 55.72 0.0 uncharacterized LOC103944909
blastp_kegg lcl|mdm:103447444 6 682 + 677 Gaps:30 97.57 700 55.34 0.0 calponin homology domain-containing protein DDB_G0272472
blastp_kegg lcl|csv:101207144 1 682 + 682 Gaps:30 99.86 709 53.81 0.0 uncharacterized LOC101207144
blastp_kegg lcl|cmo:103497155 1 681 + 681 Gaps:59 99.86 739 53.25 0.0 centrosomal protein of 83 kDa
blastp_kegg lcl|pmum:103323459 3 682 + 680 Gaps:11 99.42 685 55.80 0.0 uncharacterized protein PFB0765w
blastp_kegg lcl|pper:PRUPE_ppa020716mg 3 682 + 680 Gaps:13 99.13 687 55.21 0.0 hypothetical protein
blastp_kegg lcl|vvi:100260350 9 681 + 673 Gaps:60 86.26 713 60.33 0.0 uncharacterized LOC100260350
rpsblast_cdd gnl|CDD|202652 549 681 + 133 Gaps:1 100.00 132 62.88 2e-39 pfam03469 XH XH domain. The XH (rice gene X Homology) domain is found in a family of plant proteins including gene X. The molecular function of these proteins is unknown. However these proteins usually contain an XS domain that is also found in the PTGS protein SGS3. This domain contains a conserved glutamate residue that may be functionally important.
rpsblast_cdd gnl|CDD|190648 167 283 + 117 Gaps:3 100.00 116 54.31 5e-38 pfam03468 XS XS domain. The XS (rice gene X and SGS3) domain is found in a family of plant proteins including gene X and SGS3. SGS3 is thought to be involved in post-transcriptional gene silencing (PTGS). This domain contains a conserved aspartate residue that may be functionally important. The XS domain has recently been predicted to possess an RRM-like RNA-binding domain by fold recognition.
rpsblast_cdd gnl|CDD|190649 41 82 + 42 Gaps:1 100.00 43 67.44 2e-09 pfam03470 zf-XS XS zinc finger domain. This domain is a putative nucleic acid binding zinc finger found in proteins that also contain an XS domain.
rpsblast_cdd gnl|CDD|31389 311 586 + 276 Gaps:3 23.99 1163 18.64 9e-07 COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning].
rpsblast_kog gnl|CDD|36214 299 640 + 342 Gaps:53 24.21 1293 35.14 5e-08 KOG0996 KOG0996 KOG0996 Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning].
rpsblast_kog gnl|CDD|35383 285 553 + 269 Gaps:37 14.40 1930 19.06 2e-07 KOG0161 KOG0161 KOG0161 Myosin class II heavy chain [Cytoskeleton].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 168 682 515 PTHR21596 none none none
Coils 372 424 53 Coil none none none
Pfam 41 81 41 PF03470 none XS zinc finger domain IPR005381
PANTHER 168 682 515 PTHR21596:SF3 none none none
Pfam 549 681 133 PF03469 none XH domain IPR005379
Coils 602 623 22 Coil none none none
Pfam 168 283 116 PF03468 none XS domain IPR005380
Coils 325 346 22 Coil none none none
Coils 435 473 39 Coil none none none
Coils 484 529 46 Coil none none none

0 Localization

0 Qtllist

0 Targeting