Protein : Qrob_P0246640.2 Q. robur
Protein Identifier  ? Qrob_P0246640.2 Organism . Name  Quercus robur
Score  94.5 Score Type  egn
Protein Description  (M=4) K03869 - cullin 3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 689  
Kegg Orthology  K03869
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0031625 ubiquitin protein ligase binding Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
GO:0031461 cullin-RING ubiquitin ligase complex Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_011755 9 688 + 680 none 92.90 732 92.50 0.0 Cullin 3
blastp_kegg lcl|cic:CICLE_v10030804mg 9 688 + 680 none 92.90 732 92.21 0.0 hypothetical protein
blastp_kegg lcl|cit:102622384 9 688 + 680 none 92.90 732 92.21 0.0 cullin-3A-like
blastp_kegg lcl|fve:101307109 9 688 + 680 none 92.90 732 91.62 0.0 cullin-3A-like
blastp_kegg lcl|rcu:RCOM_0836020 15 688 + 674 none 100.00 674 92.43 0.0 cullin putative
blastp_kegg lcl|pop:POPTR_0010s10320g 9 688 + 680 Gaps:1 92.91 733 91.04 0.0 POPTRDRAFT_566300 cullin family protein
blastp_kegg lcl|pop:POPTR_0008s14780g 9 688 + 680 none 92.90 732 90.88 0.0 POPTRDRAFT_832803 cullin family protein
blastp_kegg lcl|pper:PRUPE_ppa001991mg 9 688 + 680 none 92.90 732 92.21 0.0 hypothetical protein
blastp_kegg lcl|pxb:103950834 9 688 + 680 none 92.90 732 91.47 0.0 cullin-3A
blastp_kegg lcl|pmum:103321593 9 688 + 680 none 92.90 732 91.62 0.0 cullin-3A
blastp_pdb 2hye_C 9 688 + 680 Gaps:19 88.67 759 41.90 4e-164 mol:protein length:759 Cullin-4A
blastp_pdb 4a0k_A 9 688 + 680 Gaps:19 90.70 742 41.90 4e-164 mol:protein length:742 CULLIN-4A
blastp_pdb 4a0l_H 9 688 + 680 Gaps:19 92.70 726 41.46 9e-161 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0l_E 9 688 + 680 Gaps:19 92.70 726 41.46 9e-161 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0c_E 9 688 + 680 Gaps:19 90.82 741 41.46 1e-160 mol:protein length:741 CULLIN-4B
blastp_pdb 4a0c_C 9 688 + 680 Gaps:19 90.82 741 41.46 1e-160 mol:protein length:741 CULLIN-4B
blastp_pdb 1ldj_A 21 688 + 668 Gaps:46 91.05 760 33.67 5e-112 mol:protein length:760 Cullin homolog 1
blastp_pdb 1u6g_A 21 688 + 668 Gaps:46 89.18 776 33.67 8e-112 mol:protein length:776 Cullin homolog 1
blastp_pdb 4apf_B 9 336 + 328 Gaps:8 85.57 388 49.70 2e-100 mol:protein length:388 CULLIN 3
blastp_pdb 4ap2_B 9 336 + 328 Gaps:8 80.98 410 49.70 3e-100 mol:protein length:410 CULLIN-3
blastp_uniprot_sprot sp|Q9ZVH4|CUL3A_ARATH 9 688 + 680 none 92.90 732 84.26 0.0 Cullin-3A OS Arabidopsis thaliana GN CUL3A PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9L0|CUL3B_ARATH 9 688 + 680 none 92.90 732 84.12 0.0 Cullin-3B OS Arabidopsis thaliana GN CUL3B PE 1 SV 1
blastp_uniprot_sprot sp|Q54NZ5|CUL3_DICDI 9 688 + 680 Gaps:42 93.11 769 53.77 0.0 Cullin-3 OS Dictyostelium discoideum GN culC PE 3 SV 1
blastp_uniprot_sprot sp|Q13618|CUL3_HUMAN 9 688 + 680 Gaps:39 92.58 768 53.45 0.0 Cullin-3 OS Homo sapiens GN CUL3 PE 1 SV 2
blastp_uniprot_sprot sp|B5DF89|CUL3_RAT 9 688 + 680 Gaps:39 92.58 768 53.31 0.0 Cullin-3 OS Rattus norvegicus GN Cul3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9JLV5|CUL3_MOUSE 9 688 + 680 Gaps:39 92.58 768 53.16 0.0 Cullin-3 OS Mus musculus GN Cul3 PE 1 SV 1
blastp_uniprot_sprot sp|Q6DE95|CUL3A_XENLA 9 688 + 680 Gaps:37 92.58 768 52.88 0.0 Cullin-3-A OS Xenopus laevis GN cul3a PE 1 SV 1
blastp_uniprot_sprot sp|Q6GPF3|CUL3B_XENLA 9 688 + 680 Gaps:37 92.58 768 52.74 0.0 Cullin-3-B OS Xenopus laevis GN cul3b PE 1 SV 1
blastp_uniprot_sprot sp|A4IHP4|CUL3_XENTR 9 688 + 680 Gaps:37 92.58 768 52.74 0.0 Cullin-3 OS Xenopus tropicalis GN cul3 PE 2 SV 1
blastp_uniprot_sprot sp|Q17391|CUL3_CAEEL 9 688 + 680 Gaps:45 93.05 777 41.63 0.0 Cullin-3 OS Caenorhabditis elegans GN cul-3 PE 1 SV 2

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 225 333 109 G3DSA:1.20.1310.10 none none none
SUPERFAMILY 9 328 320 SSF74788 none none IPR016159
Coils 181 202 22 Coil none none none
Pfam 9 587 579 PF00888 none Cullin family IPR001373
ProSiteProfiles 330 557 228 PS50069 "UniPathway:UPA00143" Cullin family profile. IPR016158
Gene3D 517 585 69 G3DSA:1.10.10.10 none none IPR011991
PANTHER 9 688 680 PTHR11932 none none none
SUPERFAMILY 324 596 273 SSF75632 "UniPathway:UPA00143" none IPR016158
Gene3D 106 221 116 G3DSA:1.20.1310.10 none none none
Gene3D 586 688 103 G3DSA:1.10.10.10 none none IPR011991
SMART 360 506 147 SM00182 "UniPathway:UPA00143" Cullin IPR016158
Gene3D 9 103 95 G3DSA:1.20.1310.10 none none none
SMART 615 682 68 SM00884 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Pfam 615 681 67 PF10557 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Gene3D 446 511 66 G3DSA:4.10.1030.10 none none none
SUPERFAMILY 599 688 90 SSF46785 none none none
Gene3D 334 436 103 G3DSA:1.20.1310.10 none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting