Protein : Qrob_P0232430.2 Q. robur
Protein Identifier  ? Qrob_P0232430.2 Organism . Name  Quercus robur
Protein Description  (M=3) K15378 - solute carrier family 45, member 1/2/4 Alias (in v1)  Qrob_P0250070.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 501  
Kegg Orthology  K15378
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0005887 integral component of plasma membrane The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0008515 sucrose transmembrane transporter activity Enables the transfer of sucrose from one side of the membrane to the other. Sucrose is the disaccharide O-beta-D-fructofuranosyl-(2->1)-alpha-D-glucopyranoside, a sweet-tasting, non-reducing sugar isolated industrially from sugar beet or sugar cane.
GO:0015770 sucrose transport The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0686970 7 491 + 485 Gaps:16 94.00 533 74.25 0.0 sucrose transport protein putative
blastp_kegg lcl|mdm:103443890 1 500 + 500 Gaps:16 100.00 508 73.03 0.0 sucrose transport protein-like
blastp_kegg lcl|pper:PRUPE_ppa004033mg 12 500 + 489 Gaps:17 93.26 534 71.89 0.0 hypothetical protein
blastp_kegg lcl|pxb:103940043 1 500 + 500 Gaps:17 100.00 507 73.77 0.0 sucrose transport protein-like
blastp_kegg lcl|pxb:103931351 1 500 + 500 Gaps:20 100.00 512 72.07 0.0 sucrose transport protein-like
blastp_kegg lcl|pxb:103964096 1 500 + 500 Gaps:17 100.00 507 73.96 0.0 sucrose transport protein-like
blastp_kegg lcl|cam:101495868 11 492 + 482 Gaps:16 92.93 523 73.66 0.0 sucrose transport protein-like
blastp_kegg lcl|pxb:103940447 1 500 + 500 Gaps:16 100.00 508 72.64 0.0 sucrose transport protein-like
blastp_kegg lcl|pop:POPTR_0013s11950g 2 492 + 491 Gaps:21 95.33 535 72.35 0.0 putative sucrose-H+ symporter family protein
blastp_kegg lcl|pmum:103343198 1 500 + 500 Gaps:19 100.00 511 70.65 0.0 sucrose transport protein
blastp_uniprot_sprot sp|Q39231|SUC2_ARATH 15 485 + 471 Gaps:4 92.38 512 72.52 0.0 Sucrose transport protein SUC2 OS Arabidopsis thaliana GN SUC2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9C8X2|SUC5_ARATH 1 485 + 485 Gaps:13 97.27 512 64.66 0.0 Sucrose transport protein SUC5 OS Arabidopsis thaliana GN SUC5 PE 1 SV 1
blastp_uniprot_sprot sp|Q39232|SUC1_ARATH 1 485 + 485 Gaps:2 94.93 513 68.38 0.0 Sucrose transport protein SUC1 OS Arabidopsis thaliana GN SUC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q03411|SUT_SPIOL 9 485 + 477 Gaps:19 92.57 525 67.90 0.0 Sucrose transport protein OS Spinacia oleracea PE 2 SV 1
blastp_uniprot_sprot sp|Q67YF8|SUC7_ARATH 3 480 + 478 Gaps:7 97.56 491 67.22 0.0 Sucrose transport protein SUC7 OS Arabidopsis thaliana GN SUC7 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZVK6|SUC8_ARATH 3 480 + 478 Gaps:8 97.56 492 67.92 0.0 Sucrose transport protein SUC8 OS Arabidopsis thaliana GN SUC8 PE 1 SV 1
blastp_uniprot_sprot sp|Q6A329|SUC6_ARATH 3 480 + 478 Gaps:8 97.56 492 67.29 0.0 Putative sucrose transport protein SUC6 OS Arabidopsis thaliana GN SUC6 PE 5 SV 2
blastp_uniprot_sprot sp|Q9FG00|SUC9_ARATH 3 480 + 478 Gaps:9 97.56 491 66.39 0.0 Sucrose transport protein SUC9 OS Arabidopsis thaliana GN SUC9 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FE59|SUC4_ARATH 6 480 + 475 Gaps:16 93.14 510 52.84 2e-154 Sucrose transport protein SUC4 OS Arabidopsis thaliana GN SUC4 PE 1 SV 2
blastp_uniprot_sprot sp|Q0ILJ3|SUT2_ORYSJ 11 480 + 470 Gaps:10 93.81 501 50.64 3e-147 Sucrose transport protein SUT2 OS Oryza sativa subsp. japonica GN SUT2 PE 2 SV 2
rpsblast_cdd gnl|CDD|162292 13 485 + 473 Gaps:12 100.00 477 66.88 0.0 TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters found in plants from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1 SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
rpsblast_cdd gnl|CDD|200987 26 447 + 422 Gaps:60 96.21 449 18.75 2e-12 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|32393 6 279 + 274 Gaps:30 53.53 467 24.00 5e-08 COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].
rpsblast_kog gnl|CDD|35856 7 480 + 474 Gaps:4 95.58 498 59.03 1e-151 KOG0637 KOG0637 KOG0637 Sucrose transporter and related proteins [Carbohydrate transport and metabolism].

32 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 348 370 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 14 484 471 TIGR01301 "UniPathway:UPA00238" GPH_sucrose: sucrose/H+ symporter IPR005989
Phobius 125 143 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 16 483 468 SSF103473 none none IPR020846
Phobius 480 500 21 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 414 424 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 106 124 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 144 163 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 14 14 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 35 53 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 164 184 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 447 457 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 390 413 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 21 449 429 PF00083 none Sugar (and other) transporter IPR005828
Phobius 185 211 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 263 487 225 G3DSA:1.20.1250.20 none none none
Gene3D 16 238 223 G3DSA:1.20.1250.20 none none none
Phobius 317 336 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 337 347 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 425 446 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 54 75 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 268 286 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 87 105 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 76 86 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 371 389 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 231 267 37 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 212 230 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 15 34 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 4 500 497 PTHR19432:SF27 "UniPathway:UPA00238";signature_desc=SUCROSE TRANSPORT PROTEIN SUC3 (PTHR19432:SF27) none IPR005989
Phobius 287 316 30 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

12 Localization

Analysis Start End Length
TMHMM 390 412 22
TMHMM 211 230 19
TMHMM 268 286 18
TMHMM 53 75 22
TMHMM 125 143 18
TMHMM 21 43 22
TMHMM 164 186 22
TMHMM 457 479 22
TMHMM 425 447 22
TMHMM 313 335 22
TMHMM 88 110 22
TMHMM 348 370 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting