Protein : Qrob_P0217420.2 Q. robur
Protein Identifier  ? Qrob_P0217420.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=9) K17470 - sulfate transporter 1, high-affinity Gene Prediction Quality  validated
Protein length 

Sequence

Length: 472  
Kegg Orthology  K17470
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005886 plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO:0008271 secondary active sulfate transmembrane transporter activity Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport.
GO:0008272 sulfate transport The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015116 sulfate transmembrane transporter activity Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0443450 12 470 + 459 Gaps:1 71.43 644 82.39 0.0 sulfate transporter putative
blastp_kegg lcl|tcc:TCM_007527 12 471 + 460 Gaps:1 70.17 657 80.69 0.0 Sulfate transporter 1 3 isoform 1
blastp_kegg lcl|cit:102619680 12 471 + 460 Gaps:4 70.41 659 79.31 0.0 sulfate transporter 1.3-like
blastp_kegg lcl|pop:POPTR_0005s16530g 13 462 + 450 none 69.55 647 79.56 0.0 POPTRDRAFT_760831 high affinity sulfate transporter family protein
blastp_kegg lcl|pmum:103319166 13 471 + 459 Gaps:1 68.86 668 79.13 0.0 sulfate transporter 1.3-like
blastp_kegg lcl|cic:CICLE_v10000528mg 12 471 + 460 Gaps:4 70.41 659 79.09 0.0 hypothetical protein
blastp_kegg lcl|sly:543685 12 469 + 458 Gaps:1 69.86 657 77.56 0.0 ST1 sulfate transporter 1
blastp_kegg lcl|vvi:100260708 12 470 + 459 Gaps:1 69.17 665 80.43 0.0 high affinity sulfate transporter 2-like
blastp_kegg lcl|sot:102577897 12 469 + 458 Gaps:1 69.86 657 77.78 0.0 ST1 high affinity sulfate transporter type 1
blastp_kegg lcl|pper:PRUPE_ppa024463mg 13 471 + 459 Gaps:1 68.86 668 78.70 0.0 hypothetical protein
blastp_pdb 2kln_A 339 463 + 125 Gaps:8 90.00 130 27.35 5e-10 mol:protein length:130 PROBABLE SULPHATE-TRANSPORT TRANSMEMBRANE PRO
blastp_pdb 3llo_A 323 462 + 140 Gaps:8 93.71 143 27.61 1e-07 mol:protein length:143 Prestin
blastp_uniprot_sprot sp|P53392|SUT2_STYHA 13 468 + 456 Gaps:1 69.03 662 75.93 0.0 High affinity sulfate transporter 2 OS Stylosanthes hamata GN ST2 PE 2 SV 1
blastp_uniprot_sprot sp|P53391|SUT1_STYHA 13 468 + 456 Gaps:3 68.82 667 76.25 0.0 High affinity sulfate transporter 1 OS Stylosanthes hamata GN ST1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FEP7|SUT13_ARATH 12 463 + 452 none 68.90 656 75.00 0.0 Sulfate transporter 1.3 OS Arabidopsis thaliana GN SULTR1 3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SAY1|SUT11_ARATH 12 462 + 451 none 69.49 649 71.84 0.0 Sulfate transporter 1.1 OS Arabidopsis thaliana GN SULTR1 1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9MAX3|SUT12_ARATH 12 463 + 452 none 69.22 653 74.12 0.0 Sulfate transporter 1.2 OS Arabidopsis thaliana GN SULTR1 2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SV13|SUT31_ARATH 12 463 + 452 Gaps:2 68.69 658 52.88 1e-175 Sulfate transporter 3.1 OS Arabidopsis thaliana GN SULTR3 1 PE 2 SV 1
blastp_uniprot_sprot sp|P53393|SUT3_STYHA 12 463 + 452 Gaps:8 71.43 644 53.91 3e-170 Low affinity sulfate transporter 3 OS Stylosanthes hamata GN ST3 PE 2 SV 1
blastp_uniprot_sprot sp|O04722|SUT21_ARATH 12 463 + 452 Gaps:12 67.06 677 55.07 4e-168 Sulfate transporter 2.1 OS Arabidopsis thaliana GN SULTR2 1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LW86|SUT34_ARATH 12 468 + 457 Gaps:1 69.83 653 50.66 1e-166 Probable sulfate transporter 3.4 OS Arabidopsis thaliana GN SULTR3 4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SXS2|SUT33_ARATH 12 462 + 451 Gaps:2 71.47 631 50.55 2e-161 Probable sulfate transporter 3.3 OS Arabidopsis thaliana GN SULTR3 3 PE 2 SV 2
rpsblast_cdd gnl|CDD|162054 12 461 + 450 Gaps:6 79.57 563 50.22 1e-148 TIGR00815 sulP high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria fungi plants and animals. Many organisms including Bacillus subtilis Synechocystis sp Saccharomyces cerevisiae Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized and all are sulfate uptake transporters. Some transport their substrate with high affinities while others transport it with relatively low affinities. Most function by SO42- :H+symport but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis a second bears two proteins one from M. tuberculosis the other from Synechocystis sp and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
rpsblast_cdd gnl|CDD|144493 12 288 + 277 Gaps:1 98.92 279 50.00 1e-90 pfam00916 Sulfate_transp Sulfate transporter family. Mutations in human SLC26A2 lead to several human diseases.
rpsblast_cdd gnl|CDD|31004 5 463 + 459 Gaps:27 78.70 554 25.92 8e-58 COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|201948 343 461 + 119 Gaps:13 100.00 106 40.57 9e-21 pfam01740 STAS STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
rpsblast_cdd gnl|CDD|132913 343 458 + 116 Gaps:9 100.00 107 35.51 4e-20 cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters plays a role in the function and regulation of the transport activity proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters with members from eubacteria plants fungi and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
rpsblast_cdd gnl|CDD|183265 12 463 + 452 Gaps:94 77.46 568 23.41 5e-16 PRK11660 PRK11660 putative transporter Provisional.
rpsblast_kog gnl|CDD|35457 5 464 + 460 Gaps:13 69.92 665 38.92 1e-117 KOG0236 KOG0236 KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism].

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 12 461 450 TIGR00815 "Reactome:REACT_15518" sulP: sulfate permease IPR001902
SUPERFAMILY 344 465 122 SSF52091 none none IPR002645
Phobius 217 221 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 280 290 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 183 193 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 12 287 276 PF00916 none Sulfate transporter family IPR011547
Phobius 90 100 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 342 465 124 PS50801 none STAS domain profile. IPR002645
Phobius 291 314 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 343 461 119 PF01740 none STAS domain IPR002645
PANTHER 12 463 452 PTHR11814:SF65 none none IPR030314
Phobius 160 182 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 12 39 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 255 279 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 122 159 38 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 315 471 157 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 101 121 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 12 463 452 PTHR11814 "Reactome:REACT_15518";signature_desc=SULFATE TRANSPORTER none IPR001902
Gene3D 345 465 121 G3DSA:3.30.750.24 none none IPR002645
Phobius 222 243 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 40 71 32 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 244 254 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 194 216 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 72 89 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

8 Localization

Analysis Start End Length
TMHMM 255 277 22
TMHMM 292 314 22
TMHMM 158 180 22
TMHMM 20 42 22
TMHMM 220 242 22
TMHMM 71 88 17
TMHMM 100 122 22
TMHMM 193 215 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 2 0.913 0.164 NON-PLANT 24