Protein : Qrob_P0176240.2 Q. robur
Protein Identifier  ? Qrob_P0176240.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) PTHR11206:SF78 - MATE EFFLUX FAMILY PROTEIN ALF5-RELATED (PTHR11206:SF78) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 428  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103947665 27 419 + 393 none 81.54 482 68.19 0.0 MATE efflux family protein ALF5-like
blastp_kegg lcl|pxb:103947597 27 419 + 393 none 81.54 482 67.68 0.0 MATE efflux family protein ALF5-like
blastp_kegg lcl|pxb:103932868 27 419 + 393 none 81.03 485 68.19 0.0 MATE efflux family protein ALF5-like
blastp_kegg lcl|pop:POPTR_0131s00210g 27 426 + 400 none 82.47 485 68.75 0.0 aberrant lateral root formation 1 family protein
blastp_kegg lcl|vvi:100241893 27 427 + 401 none 82.34 487 69.83 0.0 MATE efflux family protein ALF5-like
blastp_kegg lcl|pop:POPTR_0011s11810g 27 426 + 400 none 82.47 485 68.00 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa016427mg 27 426 + 400 Gaps:3 81.52 487 69.27 0.0 hypothetical protein
blastp_kegg lcl|mdm:103448706 27 419 + 393 Gaps:6 81.30 476 68.48 0.0 MATE efflux family protein ALF5-like
blastp_kegg lcl|tcc:TCM_046871 27 424 + 398 Gaps:14 71.53 576 66.02 0.0 MATE efflux family protein ALF5
blastp_kegg lcl|mdm:103448705 34 422 + 389 Gaps:2 77.80 500 69.41 0.0 MATE efflux family protein LAL5-like
blastp_pdb 3mku_B 35 400 + 366 Gaps:21 81.52 460 26.13 6e-19 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mku_A 35 400 + 366 Gaps:21 81.52 460 26.13 6e-19 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_B 35 400 + 366 Gaps:21 81.52 460 26.13 6e-19 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_A 35 400 + 366 Gaps:21 81.52 460 26.13 6e-19 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 27 414 + 388 none 81.34 477 59.54 7e-158 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 27 413 + 387 none 82.52 469 57.88 4e-156 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 36 420 + 385 Gaps:6 82.14 476 36.06 1e-76 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 27 411 + 385 Gaps:2 80.88 476 36.62 7e-75 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 34 424 + 391 Gaps:6 76.33 507 35.92 2e-74 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 27 420 + 394 Gaps:6 84.03 476 35.50 3e-74 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 27 419 + 393 none 81.37 483 34.35 3e-74 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 4 419 + 416 none 87.21 477 32.69 2e-71 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 27 421 + 395 Gaps:2 82.56 476 33.33 8e-70 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9USK3|YJ2D_SCHPO 22 386 + 365 Gaps:16 68.83 539 33.69 8e-54 Uncharacterized transporter C4B3.13 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC4B3.13 PE 3 SV 1
rpsblast_cdd gnl|CDD|162043 34 330 + 297 Gaps:5 87.13 342 30.54 3e-38 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|30880 35 417 + 383 Gaps:7 84.40 455 25.26 5e-34 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_cdd gnl|CDD|179333 58 407 + 350 Gaps:21 76.54 456 24.93 4e-30 PRK01766 PRK01766 multidrug efflux protein Reviewed.
rpsblast_cdd gnl|CDD|190033 35 371 + 337 Gaps:4 98.76 161 44.65 7e-18 pfam01554 MatE MatE. The MatE domain.
rpsblast_cdd gnl|CDD|166843 61 402 + 342 Gaps:27 75.65 464 23.93 1e-11 PRK00187 PRK00187 multidrug efflux protein NorA Provisional.
rpsblast_kog gnl|CDD|36561 35 419 + 385 Gaps:2 80.97 473 41.51 1e-85 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 35 386 352 TIGR00797 "Reactome:REACT_15518","Reactome:REACT_20633" matE: MATE efflux family protein IPR002528
Phobius 309 327 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 34 412 379 PTHR11206 none none none
Phobius 356 378 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 384 405 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 34 412 379 PTHR11206:SF78 none none none
Phobius 181 199 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 241 264 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 379 383 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 285 308 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 128 150 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 56 56 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 328 349 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 406 427 22 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 80 98 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 156 180 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 350 355 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 200 221 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 57 79 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 222 240 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 117 127 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 34 148 115 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Pfam 212 371 160 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 99 116 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 151 155 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 265 284 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

10 Localization

Analysis Start End Length
TMHMM 129 151 22
TMHMM 385 404 19
TMHMM 237 259 22
TMHMM 287 309 22
TMHMM 200 222 22
TMHMM 324 346 22
TMHMM 58 80 22
TMHMM 353 375 22
TMHMM 161 180 19
TMHMM 100 122 22

15 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 5 0.716 0.022 NON-PLANT 29