Protein : Qrob_P0166660.2 Q. robur
Protein Identifier  ? Qrob_P0166660.2 Organism . Name  Quercus robur
Score  85.1 Score Type  egn
Protein Description  (M=18) PF03107 - C1 domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 504  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0047134 protein-disulfide reductase activity Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+.
GO:0035556 intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_025246 5 503 + 499 Gaps:251 98.52 674 51.20 8e-88 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s05820g 3 503 + 501 Gaps:239 97.19 675 46.80 6e-81 POPTRDRAFT_576373 DC1 domain-containing family protein
blastp_kegg lcl|tcc:TCM_024834 5 503 + 499 Gaps:387 96.07 1246 45.28 8e-69 hypothetical protein
blastp_kegg lcl|tcc:TCM_025071 2 503 + 502 Gaps:200 98.07 674 42.36 6e-66 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pvu:PHAVU_001G142800g 8 499 + 492 Gaps:73 92.38 564 32.25 8e-66 hypothetical protein
blastp_kegg lcl|tcc:TCM_042866 5 503 + 499 Gaps:213 97.29 737 42.12 2e-65 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|gmx:100810028 8 499 + 492 Gaps:74 92.42 567 30.53 7e-65 uncharacterized LOC100810028
blastp_kegg lcl|tcc:TCM_025068 2 502 + 501 Gaps:213 97.31 670 46.93 1e-64 Cysteine/Histidine-rich C1 domain family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_026405 6 503 + 498 Gaps:210 93.03 703 39.91 3e-64 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s04740g 3 499 + 497 Gaps:264 98.42 698 39.88 1e-61 hypothetical protein

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 356 437 82 SSF57889 none none none
SUPERFAMILY 173 231 59 SSF57889 none none none
SMART 18 67 50 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 77 124 48 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SUPERFAMILY 12 60 49 SSF57889 none none none
SUPERFAMILY 271 335 65 SSF57889 none none none
SUPERFAMILY 96 184 89 SSF57889 none none none
SUPERFAMILY 448 503 56 SSF57889 none none none
Gene3D 90 119 30 G3DSA:3.30.60.20 none none none
Pfam 294 322 29 PF03107 none C1 domain IPR004146
PANTHER 14 447 434 PTHR32410 none none none
Pfam 92 119 28 PF07649 none C1-like domain IPR011424
Pfam 143 171 29 PF07649 none C1-like domain IPR011424

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting