Protein : Qrob_P0157050.2 Q. robur
Protein Identifier  ? Qrob_P0157050.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=10) KOG2392 - Serpin [Defense mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 88  
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0 Synonyms

0 GO Terms

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sita:101767628 3 76 + 74 Gaps:1 14.60 500 39.73 2e-08 putative serpin-Z12-like
blastp_kegg lcl|rcu:RCOM_0790520 4 82 + 79 Gaps:3 19.05 399 43.42 8e-08 Protein Z putative
blastp_kegg lcl|pvu:PHAVU_009G062300g 16 76 + 61 Gaps:4 15.33 424 49.23 1e-07 hypothetical protein
blastp_kegg lcl|mtr:MTR_110s0001 23 73 + 51 none 56.67 90 54.90 2e-07 Serpin-ZX
blastp_kegg lcl|mtr:MTR_3g018740 5 77 + 73 Gaps:9 11.39 632 50.00 2e-07 Serpin-ZX
blastp_kegg lcl|mtr:MTR_6g046890 24 73 + 50 none 36.23 138 50.00 4e-07 Serpin-ZX
blastp_kegg lcl|fve:101302364 5 72 + 68 Gaps:2 16.34 404 43.94 4e-07 serpin-ZX-like
blastp_kegg lcl|gmx:100775287 16 76 + 61 Gaps:4 16.71 389 47.69 7e-07 serpin-ZX-like
blastp_kegg lcl|gmx:100806180 16 76 + 61 Gaps:4 16.71 389 47.69 7e-07 serpin-ZX-like
blastp_kegg lcl|mtr:MTR_3g101190 14 76 + 63 Gaps:4 21.47 312 43.28 1e-06 Serpin-ZX
blastp_uniprot_sprot sp|Q7XMK0|SPZ11_ORYSJ 1 72 + 72 Gaps:3 17.92 385 37.68 5e-06 Putative non-inhibitory serpin-Z11 OS Oryza sativa subsp. japonica GN Os04g0533700 PE 3 SV 1
rpsblast_cdd gnl|CDD|29118 2 74 + 73 none 19.16 381 38.36 2e-08 cd02043 plant_SERPIN SERine Proteinase INhibitors (serpins) plant specific subgroup. It has been suggested that plant serpins play a role in defense against insect predators. This subgroup corresponds to clade P of the serpin superfamily. In general serpins exhibit conformational polymorphism shifting from native to cleaved latent delta or polymorphic forms. Many serpins such as antitrypsin and antichymotrypsin function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones..
rpsblast_cdd gnl|CDD|200983 12 62 + 51 none 13.82 369 41.18 2e-08 pfam00079 Serpin Serpin (serine protease inhibitor). Structure is a multi-domain fold containing a bundle of helices and a beta sandwich.
rpsblast_cdd gnl|CDD|29117 12 69 + 58 none 15.93 364 31.03 1e-07 cd00172 SERPIN SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved latent delta or polymorphic forms. Many serpins such as antitrypsin and antichymotrypsin function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders emphysema cirrhosis and dementia..
rpsblast_kog gnl|CDD|37603 12 72 + 61 none 16.05 380 27.87 7e-07 KOG2392 KOG2392 KOG2392 Serpin [Defense mechanisms].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 43 87 45 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 12 76 65 PF00079 none Serpin (serine protease inhibitor) IPR023796
Gene3D 12 74 63 G3DSA:3.30.497.10 none none none
Phobius 1 24 24 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 12 77 66 SSF56574 none none IPR023796
Phobius 25 42 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting