Protein : Qrob_P0153210.2 Q. robur
Protein Identifier  ? Qrob_P0153210.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0444//KOG0472//KOG0531//KOG0532//KOG0617//KOG0618//KOG2443//KOG4194//KOG4237//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Protein phosphatase 1 regulatory subunit and related proteins [Signal transduction mechanisms]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Uncharacterized conserved protein [Function unknown]. // Membrane glycoprotein LIG-1 [Signal transduction mechanisms]. // Extracellular matrix protein slit contains leucine-rich and EGF-like repeats [Extracellular structures Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1237  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0004190 aspartic-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1452420 34 1111 + 1078 Gaps:105 96.09 1075 51.89 0.0 serine/threonine-protein kinase bri1 putative (EC:1.3.1.74)
blastp_kegg lcl|mdm:103425179 7 1116 + 1110 Gaps:100 98.94 1041 49.13 0.0 leucine-rich repeat receptor-like protein CLAVATA2
blastp_kegg lcl|rcu:RCOM_1113060 3 1111 + 1109 Gaps:80 98.43 1082 48.64 0.0 leucine-rich repeat receptor protein kinase exs precursor putative (EC:1.3.1.74)
blastp_kegg lcl|pxb:103952744 8 1116 + 1109 Gaps:139 98.80 1000 50.51 0.0 LRR receptor-like serine/threonine-protein kinase FLS2
blastp_kegg lcl|mdm:103438424 1 1116 + 1116 Gaps:109 99.71 1032 49.95 0.0 LRR receptor-like serine/threonine-protein kinase GSO2
blastp_kegg lcl|rcu:RCOM_1495940 5 1107 + 1103 Gaps:120 95.54 1054 49.26 0.0 serine-threonine protein kinase plant-type putative (EC:1.3.1.74)
blastp_kegg lcl|pxb:103952798 34 1116 + 1083 Gaps:110 96.40 1028 50.05 0.0 LRR receptor-like serine/threonine-protein kinase FLS2
blastp_kegg lcl|mdm:103417809 34 1116 + 1083 Gaps:110 96.40 1028 49.95 0.0 probable leucine-rich repeat receptor-like protein kinase At2g33170
blastp_kegg lcl|gmx:100776286 34 1113 + 1080 Gaps:65 96.89 1095 46.75 0.0 LRR receptor-like serine/threonine-protein kinase GSO2-like
blastp_kegg lcl|gmx:100801973 34 1113 + 1080 Gaps:73 96.10 1102 45.51 0.0 LRR receptor-like serine/threonine-protein kinase GSO2-like
blastp_pdb 3rgz_A 38 1042 + 1005 Gaps:391 95.44 768 59.35 4e-59 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 38 1042 + 1005 Gaps:391 95.44 768 59.35 4e-59 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rj0_A 38 1072 + 1035 Gaps:391 98.45 772 57.89 1e-49 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 38 1072 + 1035 Gaps:391 98.45 772 57.89 1e-49 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 34 1047 + 1014 Gaps:305 99.36 313 65.27 6e-17 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_pdb 2omu_A 331 684 + 354 Gaps:65 73.81 462 33.43 1e-10 mol:protein length:462 Internalin-A
blastp_pdb 2omt_A 331 684 + 354 Gaps:65 73.81 462 33.14 5e-10 mol:protein length:462 Internalin-A
blastp_pdb 2omx_A 331 684 + 354 Gaps:65 73.81 462 32.55 1e-09 mol:protein length:462 Internalin-A
blastp_pdb 2omw_A 414 684 + 271 Gaps:67 63.77 461 32.99 2e-08 mol:protein length:461 Internalin-A
blastp_pdb 2omv_A 414 684 + 271 Gaps:67 63.77 461 32.99 2e-08 mol:protein length:461 Internalin-A
blastp_uniprot_sprot sp|Q9C9H7|RLP12_ARATH 34 1035 + 1002 Gaps:255 86.19 847 55.62 1e-88 Receptor-like protein 12 OS Arabidopsis thaliana GN RLP12 PE 2 SV 2
blastp_uniprot_sprot sp|O49318|Y2317_ARATH 51 1039 + 989 Gaps:376 60.05 1124 64.44 6e-86 Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS Arabidopsis thaliana GN At2g33170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIZ3|GSO2_ARATH 127 1043 + 917 Gaps:224 63.18 1252 53.86 2e-81 LRR receptor-like serine/threonine-protein kinase GSO2 OS Arabidopsis thaliana GN GSO2 PE 2 SV 2
blastp_uniprot_sprot sp|C0LGQ5|GSO1_ARATH 35 1046 + 1012 Gaps:404 66.93 1249 56.46 8e-81 LRR receptor-like serine/threonine-protein kinase GSO1 OS Arabidopsis thaliana GN GSO1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL28|FLS2_ARATH 11 1048 + 1038 Gaps:207 67.18 1173 54.57 3e-75 LRR receptor-like serine/threonine-protein kinase FLS2 OS Arabidopsis thaliana GN FLS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHI2|Y1723_ARATH 32 1087 + 1056 Gaps:244 66.76 1101 53.33 1e-73 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS Arabidopsis thaliana GN At1g17230 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LP24|Y1571_ARATH 37 1088 + 1052 Gaps:377 69.02 1120 57.31 1e-73 Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS Arabidopsis thaliana GN At1g35710 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVP0|Y5639_ARATH 35 1067 + 1033 Gaps:272 64.25 1102 61.30 2e-71 Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS Arabidopsis thaliana GN At5g63930 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LYN8|EXS_ARATH 35 1081 + 1047 Gaps:400 68.54 1192 57.53 6e-70 Leucine-rich repeat receptor protein kinase EXS OS Arabidopsis thaliana GN EXS PE 1 SV 1
blastp_uniprot_sprot sp|C0LGR3|Y4265_ARATH 35 1039 + 1005 Gaps:429 58.66 1091 60.78 2e-67 Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS Arabidopsis thaliana GN At4g26540 PE 1 SV 1

80 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 979 999 21 PF13516 none Leucine Rich repeat none
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
ProSiteProfiles 712 734 23 PS51450 none Leucine-rich repeat profile. IPR001611
Phobius 1178 1200 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1158 1177 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 277 298 22 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 643 664 22 PS51450 none Leucine-rich repeat profile. IPR001611
Phobius 1225 1236 12 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 256 608 353 SSF52047 none none none
ProSiteProfiles 979 1001 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 546 568 23 PS51450 none Leucine-rich repeat profile. IPR001611
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 373 395 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 668 690 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 474 497 24 PS51450 none Leucine-rich repeat profile. IPR001611
PANTHER 739 813 75 PTHR24420 none none none
PANTHER 410 562 153 PTHR24420 none none none
PANTHER 1 86 86 PTHR24420 none none none
PANTHER 933 1056 124 PTHR24420 none none none
PANTHER 1171 1199 29 PTHR24420 none none none
PRINTS 547 560 14 PR00019 none Leucine-rich repeat signature none
PRINTS 859 872 14 PR00019 none Leucine-rich repeat signature none
ProSiteProfiles 450 473 24 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 861 880 20 PS51450 none Leucine-rich repeat profile. IPR001611
SMART 568 595 28 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 859 885 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 424 450 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 472 498 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 520 552 33 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
ProSiteProfiles 126 147 22 PS51450 none Leucine-rich repeat profile. IPR001611

7 Localization

Analysis Start End Length
TMHMM 1205 1227 22
TMHMM 7 29 22
TMHMM 1113 1135 22
TMHMM 1178 1200 22
TMHMM 1139 1156 17
SignalP_EUK 1 26 25
TMHMM 1070 1092 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1
Bourran2_2014_nEpis_A4 Qrob_Chr09 9 v_AQ16YP22_198 s_1BM1HR_1387 18,91 18,91 43,71 lod 2,6242 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.969 0.021 NON-PLANT 26