Protein : Qrob_P0138510.2 Q. robur
Protein Identifier  ? Qrob_P0138510.2 Organism . Name  Quercus robur
Protein Description  (M=3) PF02727//PF02728 - Copper amine oxidase, N2 domain // Copper amine oxidase, N3 domain Alias (in v1)  Qrob_P0107020.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 250  
Kegg Orthology  K00276
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0005507 copper ion binding Interacting selectively and non-covalently with copper (Cu) ions.
GO:0048038 quinone binding Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
GO:0009308 amine metabolic process The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
GO:0008131 primary amine oxidase activity Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100244323 21 248 + 228 Gaps:19 36.65 674 61.94 5e-95 primary amine oxidase-like
blastp_kegg lcl|pop:POPTR_0569s00200g 1 247 + 247 Gaps:20 92.07 290 55.43 2e-94 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa016301mg 20 248 + 229 Gaps:19 36.47 669 61.89 4e-94 hypothetical protein
blastp_kegg lcl|pmum:103324275 19 248 + 230 Gaps:19 36.62 669 61.22 9e-94 primary amine oxidase-like
blastp_kegg lcl|pop:POPTR_0010s09930g 2 247 + 246 Gaps:20 88.37 301 54.89 4e-92 hypothetical protein
blastp_kegg lcl|mdm:103409894 20 241 + 222 Gaps:21 56.37 424 59.41 5e-88 primary amine oxidase-like
blastp_kegg lcl|fve:101305686 25 248 + 224 Gaps:18 36.12 670 59.92 3e-87 primary amine oxidase-like
blastp_kegg lcl|tcc:TCM_020602 1 248 + 248 Gaps:17 30.89 858 54.34 6e-87 Copper amine oxidase family protein
blastp_kegg lcl|mdm:103438321 20 248 + 229 Gaps:21 40.39 609 58.13 3e-86 primary amine oxidase-like
blastp_kegg lcl|vvi:100259696 21 248 + 228 Gaps:19 37.03 667 59.51 2e-84 primary amine oxidase-like
blastp_pdb 1w2z_D 24 248 + 225 Gaps:16 37.13 649 46.06 4e-67 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_C 24 248 + 225 Gaps:16 37.13 649 46.06 4e-67 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_B 24 248 + 225 Gaps:16 37.13 649 46.06 4e-67 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_A 24 248 + 225 Gaps:16 37.13 649 46.06 4e-67 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1ksi_B 27 248 + 222 Gaps:16 37.07 642 46.22 1e-66 mol:protein length:642 COPPER AMINE OXIDASE
blastp_pdb 1ksi_A 27 248 + 222 Gaps:16 37.07 642 46.22 1e-66 mol:protein length:642 COPPER AMINE OXIDASE
blastp_pdb 1jrq_B 25 241 + 217 Gaps:29 31.91 727 26.29 4e-13 mol:protein length:727 Copper amine oxidase
blastp_pdb 1jrq_A 25 241 + 217 Gaps:29 31.91 727 26.29 4e-13 mol:protein length:727 Copper amine oxidase
blastp_pdb 2woh_B 25 241 + 217 Gaps:29 31.91 727 26.29 4e-13 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_pdb 2woh_A 25 241 + 217 Gaps:29 31.91 727 26.29 4e-13 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_uniprot_sprot sp|Q43077|AMO_PEA 2 248 + 247 Gaps:20 39.61 674 45.32 3e-70 Primary amine oxidase OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|P49252|AMO_LENCU 9 248 + 240 Gaps:17 38.53 667 44.36 5e-67 Primary amine oxidase (Fragment) OS Lens culinaris PE 1 SV 3
blastp_uniprot_sprot sp|Q8H1H9|AMO_ARATH 27 248 + 222 Gaps:18 33.71 712 33.75 6e-36 Primary amine oxidase OS Arabidopsis thaliana GN At1g62810 PE 2 SV 1
blastp_uniprot_sprot sp|P46883|AMO_ECOLI 25 241 + 217 Gaps:29 30.65 757 26.29 4e-13 Primary amine oxidase OS Escherichia coli (strain K12) GN tynA PE 1 SV 1
blastp_uniprot_sprot sp|P49250|AMO_ENTAE 25 201 + 177 Gaps:25 25.96 755 28.57 1e-12 Primary amine oxidase OS Enterobacter aerogenes GN maoA PE 1 SV 1
blastp_uniprot_sprot sp|P80695|AMO_KLEOK 25 241 + 217 Gaps:29 30.85 752 25.43 2e-11 Primary amine oxidase OS Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN maoA PE 1 SV 2
blastp_uniprot_sprot sp|Q07123|AMO2_ARTS1 27 206 + 180 Gaps:16 29.94 648 25.26 2e-07 Copper methylamine oxidase OS Arthrobacter sp. (strain P1) GN maoII PE 1 SV 1
blastp_uniprot_sprot sp|Q07121|AMO1_ARTS1 27 206 + 180 Gaps:16 29.94 648 25.26 2e-07 Primary amine oxidase OS Arthrobacter sp. (strain P1) GN maoI PE 1 SV 1
rpsblast_cdd gnl|CDD|178179 1 242 + 242 Gaps:31 38.24 646 42.91 2e-63 PLN02566 PLN02566 amine oxidase (copper-containing).
rpsblast_cdd gnl|CDD|183164 19 242 + 224 Gaps:35 36.94 647 24.69 4e-24 PRK11504 tynA tyramine oxidase Provisional.

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 7 242 236 PTHR10638:SF28 none none none
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 26 85 60 G3DSA:3.10.450.40 none none IPR015801
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 27 84 58 PF02727 "KEGG:00260+1.4.3.21","KEGG:00350+1.4.3.21","KEGG:00360+1.4.3.21","KEGG:00410+1.4.3.21","KEGG:00950+1.4.3.21","KEGG:00960+1.4.3.21","MetaCyc:PWY-5751" Copper amine oxidase, N2 domain IPR015800
Phobius 24 249 226 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 102 209 108 SSF54416 none none IPR016182
SUPERFAMILY 25 101 77 SSF54416 none none IPR016182
Pfam 104 201 98 PF02728 none Copper amine oxidase, N3 domain IPR015802
PANTHER 7 242 236 PTHR10638 none none IPR000269
Gene3D 106 200 95 G3DSA:3.10.450.40 none none IPR015801

1 Localization

Analysis Start End Length
SignalP_EUK 1 23 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.971 0.023 NON-PLANT 23