Protein : Qrob_P0124730.2 Q. robur
Protein Identifier  ? Qrob_P0124730.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=47) 3.2.1.15 - Polygalacturonase. Code Enzyme  EC:3.2.1.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 279  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004650 polygalacturonase activity Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0016s05170g 7 276 + 270 none 56.96 474 85.19 3e-164 POPTRDRAFT_255709 glycoside hydrolase family 28 family protein
blastp_kegg lcl|tcc:TCM_024827 7 276 + 270 none 54.33 497 85.19 5e-164 Pectin lyase-like superfamily protein
blastp_kegg lcl|pmum:103339337 7 278 + 272 none 55.85 487 83.46 2e-161 polygalacturonase ADPG1
blastp_kegg lcl|fve:101305099 7 278 + 272 none 57.63 472 81.62 1e-160 exo-poly-alpha-D-galacturonosidase-like
blastp_kegg lcl|cit:102609616 7 275 + 269 none 56.04 480 81.41 2e-157 probable polygalacturonase-like
blastp_kegg lcl|ath:AT3G57790 7 278 + 272 Gaps:3 56.12 490 78.91 2e-156 pectin lyase-like superfamily protein
blastp_kegg lcl|aly:ARALYDRAFT_324272 7 271 + 265 Gaps:1 45.16 589 81.58 1e-155 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10005936mg 7 275 + 269 Gaps:1 56.72 476 79.26 2e-155 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10019007mg 7 275 + 269 Gaps:1 56.60 477 80.00 2e-154 hypothetical protein
blastp_kegg lcl|gmx:100794954 7 276 + 270 none 57.94 466 77.04 1e-150 probable polygalacturonase-like
blastp_uniprot_sprot sp|A7PZL3|PGLR_VITVI 1 131 + 131 Gaps:15 29.74 491 28.77 1e-06 Probable polygalacturonase OS Vitis vinifera GN GSVIVT00026920001 PE 1 SV 1
blastp_uniprot_sprot sp|Q27UB1|PGXB_ASPNG 10 203 + 194 Gaps:35 46.35 438 27.09 1e-06 Exopolygalacturonase B OS Aspergillus niger GN pgxB PE 3 SV 1
blastp_uniprot_sprot sp|A2QHG0|PGXB_ASPNC 10 203 + 194 Gaps:35 46.35 438 27.09 1e-06 Probable exopolygalacturonase B OS Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN pgxB PE 3 SV 1
rpsblast_cdd gnl|CDD|34993 4 127 + 124 Gaps:11 24.54 542 27.82 5e-16 COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis outer membrane].
rpsblast_cdd gnl|CDD|144034 9 199 + 191 Gaps:30 58.77 325 31.41 6e-10 pfam00295 Glyco_hydro_28 Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A) EC:3.2.1.-. These enzymes is important in cell wall metabolism.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 6 201 196 G3DSA:2.160.20.10 none none IPR012334
PANTHER 7 268 262 PTHR31339 none none none
Pfam 8 199 192 PF00295 none Glycosyl hydrolases family 28 IPR000743
SMART 65 86 22 SM00710 none Parallel beta-helix repeats IPR006626
SMART 156 181 26 SM00710 none Parallel beta-helix repeats IPR006626
SMART 119 149 31 SM00710 none Parallel beta-helix repeats IPR006626
SMART 39 60 22 SM00710 none Parallel beta-helix repeats IPR006626
SMART 12 38 27 SM00710 none Parallel beta-helix repeats IPR006626
SUPERFAMILY 6 204 199 SSF51126 none none IPR011050
PANTHER 7 268 262 PTHR31339:SF0 none none none

0 Localization

0 Qtllist

0 Targeting