Protein : Qrob_P0114110.2 Q. robur
Protein Identifier  ? Qrob_P0114110.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=1) K03942 - NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:1.6.5.3 1.6.99.3] Code Enzyme  EC:1.6.99.3, EC:1.6.5.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 499  
Kegg Orthology  K03942
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0016651 oxidoreductase activity, acting on NAD(P)H Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0051539 4 iron, 4 sulfur cluster binding Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0008137 NADH dehydrogenase (ubiquinone) activity Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.
GO:0010181 FMN binding Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_010782 16 498 + 483 Gaps:2 99.79 486 94.23 0.0 51 kDa subunit of complex I
blastp_kegg lcl|rcu:RCOM_1080980 16 498 + 483 Gaps:2 99.79 486 92.58 0.0 NADH-ubiquinone oxidoreductase flavoprotein putative (EC:1.6.99.3)
blastp_kegg lcl|pop:POPTR_0010s06750g 16 498 + 483 Gaps:3 99.79 485 93.60 0.0 POPTRDRAFT_821834 hypothetical protein
blastp_kegg lcl|mdm:103423822 16 498 + 483 Gaps:2 99.79 486 92.78 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial
blastp_kegg lcl|cit:102623084 16 498 + 483 Gaps:2 99.79 486 92.78 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial-like
blastp_kegg lcl|cam:101504056 18 497 + 480 Gaps:2 97.97 492 92.12 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial-like
blastp_kegg lcl|mtr:MTR_1g042300 18 497 + 480 Gaps:2 84.86 568 91.91 0.0 NADH-quinone oxidoreductase subunit F
blastp_kegg lcl|gmx:100810522 18 496 + 479 Gaps:3 99.59 482 91.67 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial-like
blastp_kegg lcl|sot:102578812 16 498 + 483 Gaps:2 99.59 487 90.52 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial-like (EC:1.6.99.3)
blastp_kegg lcl|sly:101268050 16 498 + 483 Gaps:2 99.59 487 90.31 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial-like
blastp_pdb 3m9s_A 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3m9s_1 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3ias_S 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3ias_J 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3ias_A 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3ias_1 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3iam_A 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3iam_1 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3i9v_A 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_pdb 3i9v_1 98 478 + 381 Gaps:12 86.99 438 50.92 3e-124 mol:protein length:438 NADH-quinone oxidoreductase subunit 1
blastp_uniprot_sprot sp|Q9FNN5|NDUV1_ARATH 16 498 + 483 Gaps:2 99.79 486 91.34 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Arabidopsis thaliana GN At5g08530 PE 2 SV 1
blastp_uniprot_sprot sp|Q54I90|NDUV1_DICDI 34 486 + 453 Gaps:1 94.78 479 72.03 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Dictyostelium discoideum GN ndufv1 PE 2 SV 1
blastp_uniprot_sprot sp|P25708|NDUV1_BOVIN 62 485 + 424 none 91.38 464 76.42 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Bos taurus GN NDUFV1 PE 1 SV 2
blastp_uniprot_sprot sp|P49821|NDUV1_HUMAN 62 486 + 425 none 91.59 464 75.76 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Homo sapiens GN NDUFV1 PE 1 SV 4
blastp_uniprot_sprot sp|Q91YT0|NDUV1_MOUSE 62 498 + 437 none 94.18 464 74.37 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Mus musculus GN Ndufv1 PE 1 SV 1
blastp_uniprot_sprot sp|Q0MQI6|NDUV1_PANTR 62 486 + 425 none 91.59 464 75.53 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Pan troglodytes GN NDUFV1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0MQI4|NDUV1_PONPY 62 486 + 425 none 91.59 464 75.76 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Pongo pygmaeus GN NDUFV1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8HXQ9|NDUV1_MACFA 62 486 + 425 none 91.59 464 75.53 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Macaca fascicularis GN NDUFV1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0MQI5|NDUV1_GORGO 62 486 + 425 none 91.59 464 75.29 0.0 NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial OS Gorilla gorilla gorilla GN NDUFV1 PE 2 SV 1
blastp_uniprot_sprot sp|Q92406|NDUV1_ASPNG 61 486 + 426 Gaps:4 86.29 496 74.07 0.0 NADH-ubiquinone oxidoreductase 51 kDa subunit mitochondrial OS Aspergillus niger GN NUO51 PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 235 250 16 PS00644 none Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. IPR001949
SUPERFAMILY 73 308 236 SSF142019 none none none
SUPERFAMILY 395 488 94 SSF140490 none none none
Pfam 115 284 170 PF01512 none Respiratory-chain NADH dehydrogenase 51 Kd subunit IPR011538
Pfam 311 360 50 PF10531 none SLBB domain IPR019554
SMART 399 444 46 SM00928 none NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IPR019575
PANTHER 48 498 451 PTHR11780 none none none
SUPERFAMILY 309 394 86 SSF142984 none none none
ProSitePatterns 412 423 12 PS00645 none Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. IPR001949
Pfam 399 444 46 PF10589 none NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IPR019575
TIGRFAM 76 485 410 TIGR01959 none nuoF_fam: NADH oxidoreductase (quinone), F subunit IPR011537

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 33   Mitochondrion 1 0.015 0.917 NON-PLANT 33