Protein : Qrob_P0078040.2 Q. robur
Protein Identifier  ? Qrob_P0078040.2 Organism . Name  Quercus robur
Score  62.2 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 200  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102616834 6 199 + 194 Gaps:17 98.14 215 67.30 2e-93 putative germin-like protein 2-3-like
blastp_kegg lcl|cic:CICLE_v10018224mg 1 199 + 199 Gaps:18 100.00 215 65.12 5e-92 hypothetical protein
blastp_kegg lcl|cit:102616247 6 199 + 194 Gaps:18 98.15 216 66.04 1e-91 putative germin-like protein 2-2-like
blastp_kegg lcl|cic:CICLE_v10017587mg 6 199 + 194 Gaps:18 98.15 216 65.57 2e-91 hypothetical protein
blastp_kegg lcl|cit:102621730 1 198 + 198 Gaps:18 99.53 215 65.42 3e-91 putative germin-like protein 2-1-like
blastp_kegg lcl|pmum:103325241 1 199 + 199 Gaps:18 100.00 217 62.21 9e-89 putative germin-like protein 2-3
blastp_kegg lcl|pper:PRUPE_ppa022275mg 1 199 + 199 Gaps:18 100.00 217 62.21 1e-88 hypothetical protein
blastp_kegg lcl|pmum:103325273 1 199 + 199 Gaps:18 100.00 217 63.59 5e-88 putative germin-like protein 2-1
blastp_kegg lcl|vvi:100245589 1 199 + 199 Gaps:17 100.00 216 62.96 2e-87 putative germin-like protein 2-1
blastp_kegg lcl|pop:POPTR_0011s16490g 1 199 + 199 Gaps:17 100.00 216 60.65 9e-87 germin-like protein 1
blastp_pdb 2et7_A 22 199 + 178 Gaps:19 98.01 201 42.64 3e-45 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_B 22 199 + 178 Gaps:19 98.01 201 42.13 2e-44 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 22 199 + 178 Gaps:19 98.01 201 42.13 2e-44 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 22 199 + 178 Gaps:19 98.01 201 41.62 5e-44 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 22 199 + 178 Gaps:19 98.01 201 41.62 5e-44 mol:protein length:201 OXALATE OXIDASE
blastp_uniprot_sprot sp|Q6K5Q0|GL21_ORYSJ 1 199 + 199 Gaps:17 100.00 216 57.87 5e-77 Putative germin-like protein 2-1 OS Oryza sativa subsp. japonica GN Os02g0491600 PE 3 SV 1
blastp_uniprot_sprot sp|Q6K5P8|GL23_ORYSJ 21 199 + 179 Gaps:17 87.89 223 59.18 9e-71 Putative germin-like protein 2-3 OS Oryza sativa subsp. japonica GN Os02g0491800 PE 3 SV 1
blastp_uniprot_sprot sp|Q6K5P9|GL22_ORYSJ 8 199 + 192 Gaps:18 94.17 223 56.67 2e-70 Putative germin-like protein 2-2 OS Oryza sativa subsp. japonica GN Os02g0491700 PE 3 SV 1
blastp_uniprot_sprot sp|Q6YZ99|GL89_ORYSJ 10 199 + 190 Gaps:18 92.86 224 55.29 5e-68 Germin-like protein 8-9 OS Oryza sativa subsp. japonica GN Os08g0189850 PE 2 SV 1
blastp_uniprot_sprot sp|Q6YZA4|GL86_ORYSJ 21 199 + 179 Gaps:18 87.56 225 56.85 3e-67 Germin-like protein 8-6 OS Oryza sativa subsp. japonica GN Os08g0189500 PE 2 SV 1
blastp_uniprot_sprot sp|Q6YZZ2|GL87_ORYSJ 19 199 + 181 Gaps:18 88.44 225 56.78 4e-67 Germin-like protein 8-7 OS Oryza sativa subsp. japonica GN GER6 PE 2 SV 1
blastp_uniprot_sprot sp|Q6YZY5|GL811_ORYSJ 19 199 + 181 Gaps:18 88.84 224 56.78 1e-66 Germin-like protein 8-11 OS Oryza sativa subsp. japonica GN Os08g0190100 PE 1 SV 1
blastp_uniprot_sprot sp|Q6YZA1|GL88_ORYSJ 19 199 + 181 Gaps:18 88.84 224 56.28 3e-66 Germin-like protein 8-8 OS Oryza sativa subsp. japonica GN Os08g0189700 PE 2 SV 1
blastp_uniprot_sprot sp|Q6YZ97|GL810_ORYSJ 19 199 + 181 Gaps:18 88.84 224 56.28 1e-65 Germin-like protein 8-10 OS Oryza sativa subsp. japonica GN GLP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6YZA9|GL82_ORYSJ 19 199 + 181 Gaps:19 90.50 221 58.00 2e-65 Germin-like protein 8-2 OS Oryza sativa subsp. japonica GN GER3 PE 2 SV 1
rpsblast_cdd gnl|CDD|197904 61 193 + 133 Gaps:15 100.00 146 26.03 3e-18 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 58 163 + 106 Gaps:17 87.05 139 28.93 6e-16 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSitePatterns 101 114 14 PS00725 none Germin family signature. IPR019780
Pfam 60 188 129 PF00190 none Cupin IPR006045
PANTHER 1 199 199 PTHR31238 none none none
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 22 197 176 G3DSA:2.60.120.10 none none IPR014710
PRINTS 123 143 21 PR00325 none Germin signature IPR001929
PRINTS 156 171 16 PR00325 none Germin signature IPR001929
SMART 58 193 136 SM00835 none Cupin IPR006045
Phobius 22 199 178 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 199 199 PTHR31238:SF1 none none none
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 23 197 175 SSF51182 none none IPR011051

4 Localization

Analysis Start End Length
TMHMM 5 22 17
SignalP_GRAM_POSITIVE 1 21 20
SignalP_EUK 1 21 20
SignalP_GRAM_NEGATIVE 1 21 20

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.955 0.016 NON-PLANT 21