Protein : Qrob_P0070260.2 Q. robur
Protein Identifier  ? Qrob_P0070260.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 253  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

28 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338264 31 251 + 221 Gaps:5 98.67 225 66.67 5e-97 germin-like protein subfamily T member 2
blastp_kegg lcl|pper:PRUPE_ppa011491mg 45 251 + 207 Gaps:4 99.52 208 68.12 1e-94 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1512950 34 252 + 219 Gaps:4 99.55 220 65.30 2e-94 Rhicadhesin receptor precursor putative (EC:1.15.1.1)
blastp_kegg lcl|cic:CICLE_v10027191mg 57 252 + 196 Gaps:3 88.24 221 70.77 6e-94 hypothetical protein
blastp_kegg lcl|cit:102611719 57 252 + 196 Gaps:3 88.24 221 70.77 6e-94 germin-like protein subfamily T member 2-like
blastp_kegg lcl|tcc:TCM_045749 15 252 + 238 Gaps:6 89.73 263 61.44 1e-93 Germin-like protein subfamily T member 2
blastp_kegg lcl|fve:101315342 31 251 + 221 Gaps:5 99.55 223 64.41 6e-92 germin-like protein subfamily T member 2-like
blastp_kegg lcl|vvi:100262082 28 252 + 225 Gaps:4 100.00 225 63.56 1e-89 germin-like protein subfamily T member 2-like
blastp_kegg lcl|pop:POPTR_0015s07940g 57 252 + 196 Gaps:4 89.09 220 68.37 3e-89 POPTRDRAFT_901916 hypothetical protein
blastp_kegg lcl|mdm:103455273 57 251 + 195 Gaps:4 89.45 218 68.72 2e-88 germin-like protein subfamily T member 2
blastp_pdb 2ete_B 58 250 + 193 Gaps:8 98.01 201 54.82 2e-64 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 58 250 + 193 Gaps:8 98.01 201 54.82 2e-64 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 59 250 + 192 Gaps:8 97.51 201 55.10 2e-64 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 59 250 + 192 Gaps:8 97.51 201 55.10 2e-64 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2et7_A 58 250 + 193 Gaps:8 98.01 201 54.31 1e-63 mol:protein length:201 Oxalate oxidase 1
blastp_uniprot_sprot sp|P92995|GLT1_ARATH 41 250 + 210 Gaps:4 94.55 220 62.50 5e-82 Germin-like protein subfamily T member 1 OS Arabidopsis thaliana GN GLP1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LMC9|GLT2_ARATH 43 250 + 208 Gaps:4 93.64 220 62.62 1e-81 Germin-like protein subfamily T member 2 OS Arabidopsis thaliana GN At1g18980 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XZY1|GL32_ORYSJ 39 250 + 212 Gaps:11 96.85 222 50.23 4e-68 Putative germin-like protein 3-2 OS Oryza sativa subsp. japonica GN Os03g0651800 PE 3 SV 1
blastp_uniprot_sprot sp|P94014|GL21_ARATH 55 250 + 196 Gaps:2 89.50 219 55.10 3e-67 Germin-like protein subfamily 2 member 1 OS Arabidopsis thaliana GN GLP4 PE 2 SV 2
blastp_uniprot_sprot sp|Q942A8|GL13_ORYSJ 39 250 + 212 Gaps:7 96.41 223 51.63 5e-67 Germin-like protein 1-3 OS Oryza sativa subsp. japonica GN GER8 PE 2 SV 1
blastp_uniprot_sprot sp|Q851K0|GL35_ORYSJ 41 250 + 210 Gaps:6 94.27 227 52.34 5e-67 Germin-like protein 3-5 OS Oryza sativa subsp. japonica GN Os03g0693900 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FZ27|GL22_ARATH 31 252 + 222 Gaps:9 99.09 219 49.31 6e-67 Germin-like protein subfamily 2 member 2 OS Arabidopsis thaliana GN At1g02335 PE 2 SV 1
blastp_uniprot_sprot sp|P45851|OXO2_HORVU 41 252 + 212 Gaps:8 96.43 224 52.78 1e-66 Oxalate oxidase 2 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|Q10BU2|GL37_ORYSJ 35 250 + 216 Gaps:8 93.56 233 50.46 2e-66 Germin-like protein 3-7 OS Oryza sativa subsp. japonica GN GER7 PE 2 SV 1
blastp_uniprot_sprot sp|Q851K1|GL36_ORYSJ 45 250 + 206 Gaps:6 91.70 229 52.38 4e-66 Germin-like protein 3-6 OS Oryza sativa subsp. japonica GN Os03g0694000 PE 2 SV 1
rpsblast_cdd gnl|CDD|197904 105 243 + 139 Gaps:2 95.21 146 41.01 2e-28 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 106 244 + 139 Gaps:16 92.81 139 34.11 4e-25 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|32101 94 199 + 106 Gaps:5 77.10 131 30.69 3e-07 COG1917 COG1917 Uncharacterized conserved protein contains double-stranded beta-helix domain [Function unknown].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 16 250 235 PTHR31238:SF7 none none none
ProSitePatterns 139 152 14 PS00725 none Germin family signature. IPR019780
Phobius 52 57 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 58 252 195 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 207 222 16 PR00325 none Germin signature IPR001929
PRINTS 144 164 21 PR00325 none Germin signature IPR001929
PRINTS 174 194 21 PR00325 none Germin signature IPR001929
Phobius 39 51 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 16 250 235 PTHR31238 none none none
Phobius 1 38 38 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 106 240 135 PF00190 none Cupin IPR006045
Gene3D 58 250 193 G3DSA:2.60.120.10 none none IPR014710
Phobius 1 57 57 SIGNAL_PEPTIDE none Signal peptide region none
SMART 95 244 150 SM00835 none Cupin IPR006045
SUPERFAMILY 59 249 191 SSF51182 none none IPR011051

1 Localization

Analysis Start End Length
SignalP_EUK 1 57 56

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting