Protein : Qrob_P0053870.2 Q. robur
Protein Identifier  ? Qrob_P0053870.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) PTHR23272 - BED FINGER-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 97  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0046983 protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppb020052mg 1 85 + 85 Gaps:4 17.72 457 56.79 1e-22 hypothetical protein
blastp_kegg lcl|zma:100193801 1 69 + 69 none 30.26 228 49.28 1e-14 uncharacterized LOC100193801
blastp_kegg lcl|cmo:103501865 1 94 + 94 Gaps:1 27.11 343 40.86 2e-13 uncharacterized LOC103501865
blastp_kegg lcl|pper:PRUPE_ppa014991mg 1 55 + 55 none 10.46 526 58.18 2e-13 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017735mg 1 63 + 63 none 11.23 561 52.38 2e-13 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa022373mg 1 55 + 55 none 9.80 561 58.18 2e-13 hypothetical protein
blastp_kegg lcl|pda:103718058 1 47 + 47 none 35.07 134 63.83 7e-13 zinc finger BED domain-containing protein RICESLEEPER 2-like
blastp_kegg lcl|pper:PRUPE_ppa023691mg 1 55 + 55 none 10.70 514 56.36 1e-12 hypothetical protein
blastp_kegg lcl|pda:103703161 1 52 + 52 Gaps:1 21.98 232 60.78 2e-12 zinc finger BED domain-containing protein RICESLEEPER 1-like
blastp_kegg lcl|pda:103700093 1 47 + 47 none 24.10 195 61.70 2e-12 zinc finger BED domain-containing protein RICESLEEPER 2-like
blastp_uniprot_sprot sp|P03010|TRAC9_MAIZE 1 56 + 56 Gaps:1 6.56 839 52.73 9e-10 Putative AC9 transposase OS Zea mays PE 4 SV 1
blastp_uniprot_sprot sp|P08770|TRA1_MAIZE 1 54 + 54 Gaps:1 6.57 807 52.83 2e-08 Putative AC transposase OS Zea mays PE 2 SV 2
rpsblast_cdd gnl|CDD|147706 1 46 + 46 none 56.10 82 52.17 1e-09 pfam05699 Dimer_Tnp_hAT hAT family dimerisation domain. This dimerisation domain is found at the C terminus of the transposases of elements belonging to the Activator superfamily (hAT element superfamily). The isolated dimerisation domain forms extremely stable dimers in vitro.
rpsblast_kog gnl|CDD|36337 1 47 + 47 none 7.33 641 55.32 1e-10 KOG1121 KOG1121 KOG1121 Tam3-transposase (Ac family) [Replication recombination and repair].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 53 78 26 Coil none none none
SUPERFAMILY 1 47 47 SSF53098 none none IPR012337
PANTHER 1 52 52 PTHR23272 none none none
Pfam 1 47 47 PF05699 none hAT family C-terminal dimerisation region IPR008906
PANTHER 1 52 52 PTHR23272:SF0 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5

0 Targeting