Protein : Qrob_P0047190.2 Q. robur
Protein Identifier  ? Qrob_P0047190.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR11132//PTHR11132:SF42 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 416  
Kegg Orthology  K15283
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103437710 1 413 + 413 Gaps:10 99.03 411 79.36 0.0 triose phosphate/phosphate translocator non-green plastid chloroplastic-like
blastp_kegg lcl|pop:POPTR_0015s08900g 1 413 + 413 Gaps:11 99.04 416 78.88 0.0 POPTRDRAFT_1101346 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa006411mg 1 413 + 413 Gaps:14 99.03 413 79.22 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0012s08370g 1 413 + 413 Gaps:7 99.03 414 77.80 0.0 POPTRDRAFT_891868 hypothetical protein
blastp_kegg lcl|pmum:103338354 1 413 + 413 Gaps:14 99.03 413 78.48 0.0 triose phosphate/phosphate translocator non-green plastid chloroplastic
blastp_kegg lcl|rcu:RCOM_1510440 1 413 + 413 Gaps:10 99.04 417 77.72 0.0 Triose phosphate/phosphate translocator non-green plastid chloroplast precursor putative
blastp_kegg lcl|pxb:103953007 1 413 + 413 Gaps:8 99.03 411 77.64 0.0 triose phosphate/phosphate translocator non-green plastid chloroplastic
blastp_kegg lcl|mdm:103455208 1 413 + 413 Gaps:8 99.03 411 76.90 0.0 triose phosphate/phosphate translocator non-green plastid chloroplastic-like
blastp_kegg lcl|cmo:103483570 1 413 + 413 Gaps:10 99.05 419 74.46 0.0 triose phosphate/phosphate translocator non-green plastid chloroplastic
blastp_kegg lcl|tcc:TCM_012088 23 413 + 391 Gaps:14 94.90 412 76.98 0.0 Glucose-6-phosphate/phosphate translocator-related
blastp_uniprot_sprot sp|Q8RXN3|PPT1_ARATH 3 413 + 411 Gaps:16 98.28 408 70.82 0.0 Phosphoenolpyruvate/phosphate translocator 1 chloroplastic OS Arabidopsis thaliana GN PPT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q84QU8|PPT2_ORYSJ 84 413 + 330 Gaps:3 81.82 407 75.98 0.0 Phosphoenolpyruvate/phosphate translocator 2 chloroplastic OS Oryza sativa subsp. japonica GN PPT2 PE 2 SV 1
blastp_uniprot_sprot sp|P52178|TPT2_BRAOB 1 413 + 413 Gaps:17 99.00 402 71.36 0.0 Triose phosphate/phosphate translocator non-green plastid chloroplastic OS Brassica oleracea var. botrytis GN NGTPT PE 2 SV 1
blastp_uniprot_sprot sp|Q69VR7|PPT1_ORYSJ 113 413 + 301 none 73.77 408 82.39 7e-179 Phosphoenolpyruvate/phosphate translocator 1 chloroplastic OS Oryza sativa subsp. japonica GN PPT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5VQL3|PPT3_ORYSJ 107 415 + 309 none 78.63 393 66.34 6e-144 Phosphoenolpyruvate/phosphate translocator 3 chloroplastic OS Oryza sativa subsp. japonica GN PPT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8H0T6|PPT2_ARATH 89 413 + 325 Gaps:5 85.64 383 63.72 4e-135 Phosphoenolpyruvate/phosphate translocator 2 chloroplastic OS Arabidopsis thaliana GN PPT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LF61|XPT_ARATH 114 413 + 300 Gaps:6 71.94 417 43.33 1e-71 Xylulose 5-phosphate/phosphate translocator chloroplastic OS Arabidopsis thaliana GN XPT PE 2 SV 1
blastp_uniprot_sprot sp|Q9M5A9|GPT1_ARATH 87 408 + 322 Gaps:5 82.22 388 41.07 2e-67 Glucose-6-phosphate/phosphate translocator 1 chloroplastic OS Arabidopsis thaliana GN GPT1 PE 2 SV 1
blastp_uniprot_sprot sp|P21727|TPT_PEA 100 408 + 309 Gaps:22 77.36 402 41.16 3e-67 Triose phosphate/phosphate translocator chloroplastic OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|Q94B38|GPT2_ARATH 44 409 + 366 Gaps:17 90.46 388 38.75 2e-66 Glucose-6-phosphate/phosphate translocator 2 chloroplastic OS Arabidopsis thaliana GN GPT2 PE 2 SV 2
rpsblast_cdd gnl|CDD|129898 115 413 + 299 Gaps:5 99.34 302 58.33 1e-104 TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions chloroplast TPTs mediate a strict antiport of substrates frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally a triose-phosphate 3-phosphoglycerate or another phosphorylated C3 compound made in the chloroplast during photosynthesis exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers such as those from maize endosperm and root membranes mediate transport of C3 compounds phosphorylated atcarbon atom 2 particularly phosphenolpyruvate in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT PPT and GPT) are divergent in sequence as well as substrate specificity but their substratespecificities overlap.
rpsblast_cdd gnl|CDD|173536 80 408 + 329 Gaps:16 98.00 350 34.11 2e-61 PTZ00343 PTZ00343 triose or hexose phosphate/phosphate translocator Provisional.
rpsblast_cdd gnl|CDD|202556 260 406 + 147 Gaps:2 100.00 149 36.24 1e-33 pfam03151 TPT Triose-phosphate Transporter family. This family includes transporters with a specificity for triose phosphate.
rpsblast_cdd gnl|CDD|144477 133 251 + 119 Gaps:2 94.44 126 26.89 1e-08 pfam00892 EamA EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6.
rpsblast_cdd gnl|CDD|162128 202 401 + 200 Gaps:12 73.08 260 22.63 1e-06 TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
rpsblast_kog gnl|CDD|36654 100 415 + 316 Gaps:8 100.00 316 37.34 2e-63 KOG1441 KOG1441 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism Amino acid transport and metabolism].
rpsblast_kog gnl|CDD|36656 119 409 + 291 Gaps:17 85.96 349 23.33 4e-17 KOG1443 KOG1443 KOG1443 Predicted integral membrane protein [Function unknown].
rpsblast_kog gnl|CDD|36655 110 415 + 306 Gaps:9 87.32 347 21.12 2e-12 KOG1442 KOG1442 KOG1442 GDP-fucose transporter [Carbohydrate transport and metabolism Posttranslational modification protein turnover chaperones Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|36657 133 413 + 281 Gaps:10 88.85 314 21.15 4e-11 KOG1444 KOG1444 KOG1444 Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism Posttranslational modification protein turnover chaperones Intracellular trafficking secretion and vesicular transport].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 19 116 98 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 405 415 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 120 413 294 PTHR11132 none none none
Phobius 197 216 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 133 250 118 PF00892 none EamA-like transporter family IPR000620
Phobius 255 271 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 314 385 72 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 161 251 91 SSF103481 none none none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 3 10 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 117 134 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 217 243 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 302 407 106 SSF103481 none none none
Phobius 292 313 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 115 414 300 TIGR00817 none tpt: Tpt phosphate/phosphoenolpyruvate translocator IPR004696
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 244 254 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 386 404 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 178 196 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 272 291 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 11 18 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 146 166 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 120 413 294 PTHR11132:SF42 none none none
Pfam 260 405 146 PF03151 none Triose-phosphate Transporter family IPR004853
Phobius 135 145 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 167 177 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

7 Localization

Analysis Start End Length
TMHMM 117 134 17
TMHMM 216 238 22
TMHMM 248 270 22
TMHMM 291 313 22
TMHMM 386 405 19
TMHMM 178 195 17
TMHMM 141 163 22

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 46   Mitochondrion 3 0.087 0.686 NON-PLANT 46