Protein : Qrob_P0044830.2 Q. robur
Protein Identifier  ? Qrob_P0044830.2 Organism . Name  Quercus robur
Score  90.0 Score Type  egn
Protein Description  (M=2) PTHR12505:SF19 - BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN-RELATED (PTHR12505:SF19) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 488  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003682 chromatin binding Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0006s26040g 1 471 + 471 Gaps:46 71.07 629 53.02 8e-137 POPTRDRAFT_561798 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0803370 1 482 + 482 Gaps:77 75.21 730 44.81 3e-125 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10007839mg 1 469 + 469 Gaps:36 84.51 581 50.10 2e-119 hypothetical protein
blastp_kegg lcl|cit:102619306 1 469 + 469 Gaps:36 72.21 680 50.10 7e-119 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa015277mg 1 470 + 470 Gaps:81 73.33 675 46.87 4e-111 hypothetical protein
blastp_kegg lcl|pmum:103320158 1 470 + 470 Gaps:121 62.74 789 47.27 4e-109 uncharacterized LOC103320158
blastp_kegg lcl|gmx:100783899 1 470 + 470 Gaps:25 70.88 656 49.03 6e-108 uncharacterized LOC100783899
blastp_kegg lcl|pop:POPTR_0018s00870g 1 471 + 471 Gaps:109 67.16 542 59.62 1e-107 POPTRDRAFT_578120 hypothetical protein
blastp_kegg lcl|cmo:103503724 1 471 + 471 Gaps:82 68.83 600 51.57 2e-101 uncharacterized LOC103503724
blastp_kegg lcl|pxb:103931029 7 447 + 441 Gaps:45 64.19 726 45.92 4e-101 uncharacterized LOC103931029
rpsblast_cdd gnl|CDD|72855 11 167 + 157 Gaps:4 100.00 159 59.12 3e-51 cd04715 BAH_Orc1p_like BAH or Bromo Adjacent Homology domain as present in the Schizosaccharomyces pombe homolog of Saccharomyces cerevisiae Orc1p and similar proteins. Orc1 is part of the Yeast Sir1-origin recognition complex the Orc1p BAH doman functions in epigenetic silencing. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..
rpsblast_cdd gnl|CDD|72847 37 154 + 118 Gaps:10 92.68 123 31.58 2e-14 cd04370 BAH BAH or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). BAH domains have first been described as domains found in the polybromo protein and Yeast Rsc1/Rsc2 (Remodeling of the Structure of Chromatin). They also occur in mammalian DNA methyltransferases and the MTA1 subunits of histone deacetylase complexes. A BAH domain is also found in Yeast Sir3p and in the origin receptor complex protein 1 (Orc1p) where it was found to interact with the N-terminal lobe of the silence information regulator 1 protein (Sir1p) confirming the initial hypothesis that BAH plays a role in protein-protein interactions..
rpsblast_cdd gnl|CDD|201789 38 150 + 113 Gaps:13 88.33 120 34.91 2e-11 pfam01426 BAH BAH domain. This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction.
rpsblast_cdd gnl|CDD|197726 39 154 + 116 Gaps:16 92.56 121 30.36 7e-09 smart00439 BAH Bromo adjacent homology domain.
rpsblast_cdd gnl|CDD|72854 44 149 + 106 Gaps:17 83.47 121 28.71 2e-08 cd04714 BAH_BAHCC1 BAH or Bromo Adjacent Homology domain as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..
rpsblast_cdd gnl|CDD|72853 19 159 + 141 Gaps:13 90.41 146 31.06 2e-07 cd04713 BAH_plant_3 BAH or Bromo Adjacent Homology domain plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..
rpsblast_cdd gnl|CDD|72861 33 124 + 92 Gaps:6 66.15 130 33.72 9e-07 cd04721 BAH_plant_1 BAH or Bromo Adjacent Homology domain plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions..

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 39 146 108 PF01426 none BAH domain IPR001025
PANTHER 1 170 170 PTHR12505:SF19 none none none
SMART 38 164 127 SM00439 none Bromo adjacent homology domain IPR001025
PANTHER 1 170 170 PTHR12505 none none none
ProSiteProfiles 38 163 126 PS51038 none BAH domain profile. IPR001025

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting