Protein : Qrob_P0040860.2 Q. robur
Protein Identifier  ? Qrob_P0040860.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=11) PTHR22595:SF37 - CHITINASE-RELATED (PTHR22595:SF37) Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 269  
Kegg Orthology  K01183
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0019s12360g 1 268 + 268 Gaps:9 100.00 275 66.18 2e-127 POPTRDRAFT_574380 hypothetical protein
blastp_kegg lcl|pmum:103323522 10 268 + 259 Gaps:11 95.65 276 68.18 7e-123 endochitinase PR4-like
blastp_kegg lcl|pper:PRUPE_ppa024941mg 10 268 + 259 Gaps:11 95.65 276 67.80 6e-122 hypothetical protein
blastp_kegg lcl|tcc:TCM_019912 1 268 + 268 Gaps:9 100.00 271 61.62 1e-118 Carrot EP3-3 chitinase
blastp_kegg lcl|mdm:103432770 1 268 + 268 Gaps:12 100.00 272 63.60 1e-117 endochitinase PR4-like
blastp_kegg lcl|pop:POPTR_0013s12870g 2 268 + 267 Gaps:10 100.00 275 61.09 1e-115 class IV chitinase family protein
blastp_kegg lcl|fve:101291199 27 268 + 242 Gaps:6 86.93 283 65.85 2e-115 endochitinase PR4-like
blastp_kegg lcl|pda:103715375 10 268 + 259 Gaps:5 97.40 269 62.60 4e-115 chitinase 6-like
blastp_kegg lcl|cic:CICLE_v10021602mg 1 268 + 268 Gaps:10 100.00 276 59.06 1e-114 hypothetical protein
blastp_kegg lcl|fve:101290830 2 268 + 267 Gaps:12 99.27 275 63.37 4e-114 endochitinase PR4-like
blastp_pdb 3hbh_A 65 268 + 204 Gaps:8 100.00 204 55.39 1e-74 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbe_X 65 268 + 204 Gaps:8 100.00 204 55.39 1e-74 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbd_A 65 268 + 204 Gaps:8 100.00 204 55.39 1e-74 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 2cjl_B 69 268 + 200 Gaps:19 99.51 204 45.32 5e-50 mol:protein length:204 SECRETED CHITINASE
blastp_pdb 2cjl_A 69 268 + 200 Gaps:19 99.51 204 45.32 5e-50 mol:protein length:204 SECRETED CHITINASE
blastp_pdb 2dbt_C 69 268 + 200 Gaps:19 76.60 265 46.31 9e-49 mol:protein length:265 chitinase C
blastp_pdb 2dbt_B 69 268 + 200 Gaps:19 76.60 265 46.31 9e-49 mol:protein length:265 chitinase C
blastp_pdb 2dbt_A 69 268 + 200 Gaps:19 76.60 265 46.31 9e-49 mol:protein length:265 chitinase C
blastp_pdb 1wvu_B 69 268 + 200 Gaps:19 76.60 265 46.31 9e-49 mol:protein length:265 chitinase C
blastp_pdb 1wvu_A 69 268 + 200 Gaps:19 76.60 265 46.31 9e-49 mol:protein length:265 chitinase C
blastp_uniprot_sprot sp|P27054|CHI4_PHAVU 27 268 + 242 Gaps:7 90.74 270 61.63 2e-104 Endochitinase PR4 OS Phaseolus vulgaris GN CHI4 PE 2 SV 1
blastp_uniprot_sprot sp|O04138|CHI4_ORYSJ 27 268 + 242 Gaps:16 89.82 285 58.20 2e-103 Chitinase 4 OS Oryza sativa subsp. japonica GN Cht4 PE 2 SV 2
blastp_uniprot_sprot sp|Q7Y1Z0|CHI5_ORYSJ 27 268 + 242 Gaps:17 89.24 288 57.20 8e-103 Chitinase 5 OS Oryza sativa subsp. japonica GN Cht5 PE 2 SV 1
blastp_uniprot_sprot sp|Q6K8R2|CHI6_ORYSJ 26 268 + 243 Gaps:4 90.41 271 58.37 6e-100 Chitinase 6 OS Oryza sativa subsp. japonica GN Cht6 PE 2 SV 1
blastp_uniprot_sprot sp|P42820|CHIP_BETVU 1 268 + 268 Gaps:21 98.96 288 52.63 2e-99 Acidic endochitinase SP2 OS Beta vulgaris GN SP2 PE 1 SV 1
blastp_uniprot_sprot sp|P29023|CHIB_MAIZE 1 268 + 268 Gaps:15 99.26 269 54.31 8e-96 Endochitinase B (Fragment) OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P29022|CHIA_MAIZE 27 268 + 242 Gaps:15 90.36 280 54.55 3e-95 Endochitinase A OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|Q06209|CHI4_BRANA 2 268 + 267 Gaps:13 100.00 268 51.87 2e-90 Basic endochitinase CHB4 OS Brassica napus PE 1 SV 2
blastp_uniprot_sprot sp|P80052|CHIT_DIOJA 34 268 + 235 Gaps:9 96.00 250 54.58 6e-88 Acidic endochitinase OS Dioscorea japonica PE 1 SV 2
blastp_uniprot_sprot sp|P06215|CHIT_PHAVU 25 268 + 244 Gaps:45 83.84 328 38.55 5e-54 Endochitinase OS Phaseolus vulgaris PE 1 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PIRSF 1 268 268 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
PANTHER 25 268 244 PTHR22595:SF37 none none none
SMART 26 57 32 SM00270 none Chitin binding domain IPR001002
ProSitePatterns 202 212 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
Gene3D 25 63 39 G3DSA:3.30.60.10 none none IPR001002
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 25 268 244 PTHR22595 none none none
Pfam 25 57 33 PF00187 none Chitin recognition protein IPR001002
ProSitePatterns 86 108 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
Gene3D 146 196 51 G3DSA:3.30.20.10 none none none
ProSiteProfiles 24 59 36 PS50941 none Chitin-binding type-1 domain profile. IPR001002
Phobius 22 25 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 26 268 243 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 68 133 66 G3DSA:1.10.530.10 none none none
Gene3D 197 268 72 G3DSA:1.10.530.10 none none none
SUPERFAMILY 65 268 204 SSF53955 none none IPR023346
Pfam 69 268 200 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
ProDom 27 57 31 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
SUPERFAMILY 25 61 37 SSF57016 none none IPR001002

2 Localization

Analysis Start End Length
SignalP_EUK 1 25 24
SignalP_GRAM_POSITIVE 1 31 30

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 1 0.939 0.024 NON-PLANT 25