Protein : Qrob_P0040780.2 Q. robur
Protein Identifier  ? Qrob_P0040780.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=11) PTHR22595:SF37 - CHITINASE-RELATED (PTHR22595:SF37) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 145  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0019s12360g 1 144 + 144 Gaps:3 51.27 275 66.67 1e-58 POPTRDRAFT_574380 hypothetical protein
blastp_kegg lcl|vvi:100245803 1 144 + 144 Gaps:4 51.09 274 67.86 2e-58 endochitinase PR4-like
blastp_kegg lcl|vvi:100256098 1 144 + 144 Gaps:4 51.09 274 67.86 4e-58 endochitinase PR4-like
blastp_kegg lcl|mdm:103408216 4 144 + 141 Gaps:3 92.62 149 63.77 1e-54 endochitinase PR4-like
blastp_kegg lcl|atr:s00066p00199930 4 144 + 141 none 50.72 278 62.41 7e-54 AMTR_s00066p00199930 hypothetical protein
blastp_kegg lcl|pop:POPTR_0019s12390g 10 144 + 135 Gaps:3 49.64 274 69.12 8e-54 POPTRDRAFT_915765 hypothetical protein
blastp_kegg lcl|mdm:103432770 4 144 + 141 Gaps:3 50.74 272 64.49 4e-53 endochitinase PR4-like
blastp_kegg lcl|atr:s00066p00199730 4 144 + 141 Gaps:4 50.00 274 62.77 6e-53 AMTR_s00066p00199730 hypothetical protein
blastp_kegg lcl|tcc:TCM_019914 1 144 + 144 Gaps:6 50.55 273 64.49 6e-53 Carrot EP3-3 chitinase
blastp_kegg lcl|fve:101291199 6 144 + 139 Gaps:1 48.76 283 63.77 2e-52 endochitinase PR4-like
blastp_pdb 3hbh_A 76 143 + 68 none 33.33 204 55.88 2e-17 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbe_X 76 143 + 68 none 33.33 204 55.88 2e-17 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbd_A 76 143 + 68 none 33.33 204 55.88 2e-17 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3iwr_B 34 142 + 109 Gaps:3 36.25 309 38.39 4e-11 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 34 142 + 109 Gaps:3 36.25 309 38.39 4e-11 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 34 142 + 109 Gaps:3 36.25 309 38.39 4e-11 mol:protein length:309 chitinase
blastp_pdb 3cql_B 77 142 + 66 Gaps:1 27.57 243 41.79 3e-10 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 77 142 + 66 Gaps:1 27.57 243 41.79 3e-10 mol:protein length:243 Endochitinase
blastp_pdb 1dxj_A 76 142 + 67 Gaps:1 28.10 242 36.76 9e-08 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2z38_A 75 142 + 68 Gaps:1 27.94 247 37.68 3e-07 mol:protein length:247 Chitinase
blastp_uniprot_sprot sp|P27054|CHI4_PHAVU 24 144 + 121 Gaps:3 43.70 270 66.95 5e-46 Endochitinase PR4 OS Phaseolus vulgaris GN CHI4 PE 2 SV 1
blastp_uniprot_sprot sp|P42820|CHIP_BETVU 6 142 + 137 Gaps:14 51.04 288 55.10 2e-41 Acidic endochitinase SP2 OS Beta vulgaris GN SP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q06209|CHI4_BRANA 11 144 + 134 Gaps:4 48.51 268 60.00 3e-40 Basic endochitinase CHB4 OS Brassica napus PE 1 SV 2
blastp_uniprot_sprot sp|Q6K8R2|CHI6_ORYSJ 30 142 + 113 Gaps:5 39.85 271 61.11 4e-37 Chitinase 6 OS Oryza sativa subsp. japonica GN Cht6 PE 2 SV 1
blastp_uniprot_sprot sp|Q7Y1Z0|CHI5_ORYSJ 25 144 + 120 Gaps:10 45.14 288 53.85 5e-37 Chitinase 5 OS Oryza sativa subsp. japonica GN Cht5 PE 2 SV 1
blastp_uniprot_sprot sp|P29023|CHIB_MAIZE 13 144 + 132 Gaps:2 49.81 269 55.22 2e-36 Endochitinase B (Fragment) OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P29022|CHIA_MAIZE 30 144 + 115 Gaps:7 43.57 280 56.56 4e-36 Endochitinase A OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|O04138|CHI4_ORYSJ 30 144 + 115 Gaps:9 43.51 285 54.03 2e-35 Chitinase 4 OS Oryza sativa subsp. japonica GN Cht4 PE 2 SV 2
blastp_uniprot_sprot sp|P80052|CHIT_DIOJA 30 144 + 115 Gaps:8 45.20 250 53.98 2e-32 Acidic endochitinase OS Dioscorea japonica PE 1 SV 2
blastp_uniprot_sprot sp|P06215|CHIT_PHAVU 6 142 + 137 Gaps:17 43.29 328 35.92 2e-19 Endochitinase OS Phaseolus vulgaris PE 1 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 34 53 20 PS00026 none Chitin recognition or binding domain signature. IPR018371
Phobius 30 144 115 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 22 29 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PRINTS 47 54 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 40 47 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 32 40 9 PR00451 none Chitin-binding domain signature IPR001002
Gene3D 29 71 43 G3DSA:3.30.60.10 none none IPR001002
Gene3D 80 143 64 G3DSA:1.10.530.10 none none none
PANTHER 27 144 118 PTHR22595 none none none
ProSiteProfiles 29 64 36 PS50941 none Chitin-binding type-1 domain profile. IPR001002
ProDom 30 59 30 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
ProSitePatterns 97 119 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
SUPERFAMILY 30 70 41 SSF57016 none none IPR001002
SUPERFAMILY 76 143 68 SSF53955 none none IPR023346
PANTHER 27 144 118 PTHR22595:SF37 none none none
Pfam 30 62 33 PF00187 none Chitin recognition protein IPR001002
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SMART 31 62 32 SM00270 none Chitin binding domain IPR001002
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 80 143 64 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none

3 Localization

Analysis Start End Length
TMHMM 10 27 17
SignalP_EUK 1 29 28
SignalP_GRAM_POSITIVE 1 29 28

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting