Protein : Qrob_P0040730.2 Q. robur
Protein Identifier  ? Qrob_P0040730.2 Organism . Name  Quercus robur
Protein Description  (M=11) PTHR22595:SF37 - CHITINASE-RELATED (PTHR22595:SF37) Alias (in v1)  Qrob_P0575590.1
Code Enzyme  EC:3.2.1.14 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 275  
Kegg Orthology  K01183
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103432770 4 274 + 271 Gaps:5 100.00 272 79.78 2e-159 endochitinase PR4-like
blastp_kegg lcl|pmum:103322428 1 274 + 274 Gaps:5 100.00 275 77.45 3e-158 endochitinase PR4-like
blastp_kegg lcl|pop:POPTR_0013s12870g 1 274 + 274 Gaps:1 100.00 275 77.45 1e-156 class IV chitinase family protein
blastp_kegg lcl|pper:PRUPE_ppa009844mg 1 274 + 274 Gaps:5 100.00 275 77.45 2e-156 hypothetical protein
blastp_kegg lcl|vvi:100256098 1 274 + 274 none 100.00 274 76.28 4e-156 endochitinase PR4-like
blastp_kegg lcl|vvi:100245803 1 274 + 274 none 100.00 274 76.28 6e-156 endochitinase PR4-like
blastp_kegg lcl|tcc:TCM_019914 1 274 + 274 Gaps:2 99.63 273 75.00 4e-154 Carrot EP3-3 chitinase
blastp_kegg lcl|cic:CICLE_v10021602mg 1 274 + 274 Gaps:2 100.00 276 74.28 2e-153 hypothetical protein
blastp_kegg lcl|fve:101291199 3 274 + 272 Gaps:3 97.17 283 75.64 5e-153 endochitinase PR4-like
blastp_kegg lcl|cit:102608623 1 274 + 274 Gaps:2 100.00 276 74.64 5e-153 endochitinase PR4-like
blastp_pdb 3hbh_A 72 274 + 203 Gaps:7 100.00 204 53.92 4e-71 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbe_X 72 274 + 203 Gaps:7 100.00 204 53.92 4e-71 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbd_A 72 274 + 203 Gaps:7 100.00 204 53.92 4e-71 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 2z37_D 76 274 + 199 Gaps:35 95.08 244 39.66 1e-52 mol:protein length:244 Chitinase
blastp_pdb 2z37_C 76 274 + 199 Gaps:35 95.08 244 39.66 1e-52 mol:protein length:244 Chitinase
blastp_pdb 2z37_B 76 274 + 199 Gaps:35 95.08 244 39.66 1e-52 mol:protein length:244 Chitinase
blastp_pdb 2z37_A 76 274 + 199 Gaps:35 95.08 244 39.66 1e-52 mol:protein length:244 Chitinase
blastp_pdb 2z38_A 76 274 + 199 Gaps:35 93.93 247 39.66 2e-52 mol:protein length:247 Chitinase
blastp_pdb 2dbt_C 76 274 + 199 Gaps:18 76.60 265 47.29 4e-52 mol:protein length:265 chitinase C
blastp_pdb 2dbt_B 76 274 + 199 Gaps:18 76.60 265 47.29 4e-52 mol:protein length:265 chitinase C
blastp_uniprot_sprot sp|P27054|CHI4_PHAVU 24 274 + 251 Gaps:2 93.70 270 73.52 7e-136 Endochitinase PR4 OS Phaseolus vulgaris GN CHI4 PE 2 SV 1
blastp_uniprot_sprot sp|Q6K8R2|CHI6_ORYSJ 30 274 + 245 Gaps:3 90.77 271 69.11 5e-121 Chitinase 6 OS Oryza sativa subsp. japonica GN Cht6 PE 2 SV 1
blastp_uniprot_sprot sp|Q7Y1Z0|CHI5_ORYSJ 29 274 + 246 Gaps:14 90.28 288 60.38 2e-111 Chitinase 5 OS Oryza sativa subsp. japonica GN Cht5 PE 2 SV 1
blastp_uniprot_sprot sp|O04138|CHI4_ORYSJ 1 274 + 274 Gaps:15 100.00 285 56.84 2e-109 Chitinase 4 OS Oryza sativa subsp. japonica GN Cht4 PE 2 SV 2
blastp_uniprot_sprot sp|Q06209|CHI4_BRANA 11 274 + 264 Gaps:9 98.13 268 58.56 1e-107 Basic endochitinase CHB4 OS Brassica napus PE 1 SV 2
blastp_uniprot_sprot sp|P29023|CHIB_MAIZE 11 274 + 264 Gaps:10 98.14 269 57.58 1e-100 Endochitinase B (Fragment) OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P29022|CHIA_MAIZE 30 274 + 245 Gaps:12 91.07 280 57.65 5e-99 Endochitinase A OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P42820|CHIP_BETVU 8 274 + 267 Gaps:20 98.26 288 54.42 4e-97 Acidic endochitinase SP2 OS Beta vulgaris GN SP2 PE 1 SV 1
blastp_uniprot_sprot sp|P80052|CHIT_DIOJA 30 274 + 245 Gaps:9 100.00 250 59.60 4e-96 Acidic endochitinase OS Dioscorea japonica PE 1 SV 2
blastp_uniprot_sprot sp|P05315|CHIT_SOLTU 29 274 + 246 Gaps:46 87.80 328 41.32 8e-62 Endochitinase OS Solanum tuberosum PE 2 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 10 274 265 PTHR22595:SF37 none none none
SMART 31 62 32 SM00270 none Chitin binding domain IPR001002
Pfam 76 274 199 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Gene3D 203 274 72 G3DSA:1.10.530.10 none none none
Gene3D 75 140 66 G3DSA:1.10.530.10 none none none
ProSitePatterns 93 115 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
Phobius 30 274 245 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 208 218 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
SUPERFAMILY 28 67 40 SSF57016 none none IPR001002
Pfam 29 62 34 PF00187 none Chitin recognition protein IPR001002
Phobius 22 29 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 151 202 52 G3DSA:3.30.20.10 none none none
ProSitePatterns 34 53 20 PS00026 none Chitin recognition or binding domain signature. IPR018371
ProSiteProfiles 29 64 36 PS50941 none Chitin-binding type-1 domain profile. IPR001002
SUPERFAMILY 72 274 203 SSF53955 none none IPR023346
PANTHER 10 274 265 PTHR22595 none none none
PIRSF 2 274 273 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 28 68 41 G3DSA:3.30.60.10 none none IPR001002

3 Localization

Analysis Start End Length
SignalP_EUK 1 29 28
SignalP_GRAM_POSITIVE 1 29 28
SignalP_GRAM_NEGATIVE 1 29 28

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 1 0.938 0.028 NON-PLANT 29