Protein : Qrob_P0039440.2 Q. robur
Protein Identifier  ? Qrob_P0039440.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=9) K09874 - aquaporin NIP Gene Prediction Quality  validated
Protein length 

Sequence

Length: 217  
Kegg Orthology  K09874
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa016457mg 2 216 + 215 Gaps:47 98.84 259 50.39 4e-75 hypothetical protein
blastp_kegg lcl|pmum:103341593 2 216 + 215 Gaps:47 95.88 267 50.39 4e-75 probable aquaporin NIP-type
blastp_kegg lcl|cit:102622625 6 215 + 210 Gaps:44 92.36 275 53.94 3e-73 probable aquaporin NIP-type-like
blastp_kegg lcl|fve:101290760 1 216 + 216 Gaps:51 94.35 283 49.06 1e-72 probable aquaporin NIP-type-like
blastp_kegg lcl|pop:POPTR_0010s12330g 3 212 + 210 Gaps:44 96.58 263 48.82 6e-70 POPTRDRAFT_566501 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10017700mg 30 215 + 186 Gaps:44 92.00 250 56.09 6e-70 hypothetical protein
blastp_kegg lcl|sly:101252874 1 216 + 216 Gaps:48 97.06 272 48.86 1e-69 probable aquaporin NIP-type-like
blastp_kegg lcl|pda:103701924 5 216 + 212 Gaps:44 94.12 272 48.05 1e-69 probable aquaporin NIP-type
blastp_kegg lcl|pxb:103931857 9 216 + 208 Gaps:53 93.88 278 47.51 7e-69 probable aquaporin NIP-type
blastp_kegg lcl|pxb:103947029 9 216 + 208 Gaps:53 93.88 278 47.51 7e-69 probable aquaporin NIP-type
blastp_pdb 3nk5_B 26 104 + 79 Gaps:2 34.62 234 40.74 2e-14 mol:protein length:234 Aquaporin Z
blastp_pdb 3nk5_A 26 104 + 79 Gaps:2 34.62 234 40.74 2e-14 mol:protein length:234 Aquaporin Z
blastp_pdb 3nkc_B 26 104 + 79 Gaps:2 34.62 234 40.74 2e-14 mol:protein length:234 Aquaporin Z
blastp_pdb 3nkc_A 26 104 + 79 Gaps:2 34.62 234 40.74 2e-14 mol:protein length:234 Aquaporin Z
blastp_pdb 3nka_B 26 104 + 79 Gaps:2 34.62 234 39.51 9e-13 mol:protein length:234 Aquaporin Z
blastp_pdb 3nka_A 26 104 + 79 Gaps:2 34.62 234 39.51 9e-13 mol:protein length:234 Aquaporin Z
blastp_pdb 2abm_H 27 104 + 78 Gaps:2 34.63 231 40.00 2e-12 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_G 27 104 + 78 Gaps:2 34.63 231 40.00 2e-12 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_F 27 104 + 78 Gaps:2 34.63 231 40.00 2e-12 mol:protein length:231 Aquaporin Z
blastp_pdb 2abm_E 27 104 + 78 Gaps:2 34.63 231 40.00 2e-12 mol:protein length:231 Aquaporin Z
blastp_uniprot_sprot sp|P49173|NIP1_NICAL 1 212 + 212 Gaps:44 94.81 270 48.05 1e-68 Probable aquaporin NIP-type OS Nicotiana alata PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIZ9|NIP41_ARATH 1 214 + 214 Gaps:46 91.17 283 47.67 2e-64 Putative aquaporin NIP4-1 OS Arabidopsis thaliana GN NIP4-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8W036|NIP42_ARATH 1 216 + 216 Gaps:46 91.87 283 46.54 8e-63 Probable aquaporin NIP4-2 OS Arabidopsis thaliana GN NIP4-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q0DK16|NIP13_ORYSJ 5 216 + 212 Gaps:45 89.86 286 40.08 2e-54 Aquaporin NIP1-3 OS Oryza sativa subsp. japonica GN NIP1-3 PE 3 SV 2
blastp_uniprot_sprot sp|Q40746|NIP11_ORYSJ 13 215 + 203 Gaps:45 87.32 284 42.74 5e-53 Aquaporin NIP1-1 OS Oryza sativa subsp. japonica GN NIP1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LFP7|NIP12_ARATH 25 213 + 189 Gaps:52 81.97 294 42.74 5e-52 Aquaporin NIP1-2 OS Arabidopsis thaliana GN NIP1-2 PE 1 SV 2
blastp_uniprot_sprot sp|P08995|NO26_SOYBN 13 211 + 199 Gaps:47 90.04 271 41.80 2e-50 Nodulin-26 OS Glycine max PE 1 SV 2
blastp_uniprot_sprot sp|Q0JPT5|NIP12_ORYSJ 25 210 + 186 Gaps:64 82.51 303 40.40 3e-49 Aquaporin NIP1-2 OS Oryza sativa subsp. japonica GN NIP1-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VZW1|NIP11_ARATH 25 213 + 189 Gaps:52 81.42 296 42.74 6e-49 Aquaporin NIP1-1 OS Arabidopsis thaliana GN NIP1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ATN4|NIP11_MAIZE 16 215 + 200 Gaps:46 87.23 282 41.87 3e-46 Aquaporin NIP1-1 OS Zea mays GN NIP1-1 PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 133 200 68 G3DSA:1.20.1080.10 none none IPR023271
Gene3D 25 107 83 G3DSA:1.20.1080.10 none none IPR023271
Phobius 194 216 23 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 121 145 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 137 190 54 PF00230 none Major intrinsic protein IPR000425
Pfam 23 107 85 PF00230 none Major intrinsic protein IPR000425
Phobius 1 57 57 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 146 171 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 85 93 9 PS00221 none MIP family signature. IPR022357
PRINTS 29 48 20 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 67 91 25 PR00783 none Major intrinsic protein family signature IPR000425
PANTHER 18 216 199 PTHR19139 none none IPR000425
SUPERFAMILY 25 204 180 SSF81338 none none IPR023271
Phobius 79 120 42 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 58 78 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 18 216 199 PTHR19139:SF88 none none none
Phobius 172 193 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

3 Localization

Analysis Start End Length
TMHMM 171 193 22
TMHMM 54 76 22
TMHMM 119 141 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

0 Targeting