Protein : Qrob_P0032710.2 Q. robur
Protein Identifier  ? Qrob_P0032710.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 263  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa020036mg 1 253 + 253 Gaps:27 64.44 360 66.38 2e-89 hypothetical protein
blastp_kegg lcl|pmum:103330182 1 253 + 253 Gaps:68 64.22 721 57.67 1e-82 uncharacterized LOC103330182
blastp_kegg lcl|pxb:103936452 1 252 + 252 Gaps:32 62.50 352 67.27 1e-82 WAT1-related protein At5g40230-like
blastp_kegg lcl|pxb:103936432 1 252 + 252 Gaps:32 62.50 352 67.27 1e-82 WAT1-related protein At5g40230-like
blastp_kegg lcl|mdm:103442769 1 259 + 259 Gaps:59 70.35 651 54.80 3e-80 WAT1-related protein At5g40240-like
blastp_kegg lcl|crb:CARUB_v10007676mg 1 229 + 229 Gaps:26 55.62 365 63.05 3e-80 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_330483 1 253 + 253 Gaps:36 61.85 367 57.71 1e-79 hypothetical protein
blastp_kegg lcl|ath:AT5G40230 1 229 + 229 Gaps:30 56.49 370 60.77 4e-79 nodulin MtN21 /EamA-like transporter family protein
blastp_kegg lcl|brp:103850166 1 254 + 254 Gaps:29 61.81 364 56.44 6e-79 WAT1-related protein At5g40240-like
blastp_kegg lcl|tcc:TCM_016840 1 253 + 253 Gaps:27 64.27 361 59.05 2e-77 Nodulin MtN21 /EamA-like transporter family protein putative isoform 1
blastp_uniprot_sprot sp|F4KHA8|WTR41_ARATH 1 229 + 229 Gaps:30 56.49 370 60.77 2e-80 WAT1-related protein At5g40230 OS Arabidopsis thaliana GN At5g40230 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FL08|WTR42_ARATH 1 229 + 229 Gaps:28 56.79 368 60.77 6e-77 WAT1-related protein At5g40240 OS Arabidopsis thaliana GN At5g40240 PE 2 SV 1
blastp_uniprot_sprot sp|F4JK59|WTR33_ARATH 1 250 + 250 Gaps:41 60.23 347 56.46 2e-57 WAT1-related protein At4g15540 OS Arabidopsis thaliana GN At4g15540 PE 2 SV 1
blastp_uniprot_sprot sp|Q94JU2|WTR18_ARATH 1 258 + 258 Gaps:32 62.67 367 46.09 2e-53 WAT1-related protein At3g28050 OS Arabidopsis thaliana GN At3g28050 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYZ7|WTR20_ARATH 1 250 + 250 Gaps:33 61.94 360 43.05 5e-47 WAT1-related protein At3g28070 OS Arabidopsis thaliana GN At3g28070 PE 2 SV 1
blastp_uniprot_sprot sp|Q56X95|WTR23_ARATH 1 254 + 254 Gaps:36 63.66 355 45.13 7e-47 WAT1-related protein At3g28130 OS Arabidopsis thaliana GN At3g28130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LRS5|WTR22_ARATH 1 250 + 250 Gaps:34 63.46 353 43.30 6e-42 WAT1-related protein At3g28100 OS Arabidopsis thaliana GN At3g28100 PE 2 SV 1
blastp_uniprot_sprot sp|F4IYZ0|WTR21_ARATH 1 252 + 252 Gaps:34 63.13 358 41.59 4e-41 WAT1-related protein At3g28080 OS Arabidopsis thaliana GN At3g28080 PE 2 SV 1
blastp_uniprot_sprot sp|Q945L4|WTR40_ARATH 1 252 + 252 Gaps:43 62.24 339 45.02 5e-41 WAT1-related protein At5g40210 OS Arabidopsis thaliana GN At5g40210 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LI65|WTR24_ARATH 2 229 + 228 Gaps:30 56.59 364 32.52 2e-27 WAT1-related protein At3g30340 OS Arabidopsis thaliana GN At3g30340 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 1 250 + 250 Gaps:34 62.57 358 44.64 1e-39 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 158 229 72 PTHR31218 none none IPR030184
Phobius 91 113 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 178 198 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 133 133 PTHR31218 none none IPR030184
Phobius 204 224 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 158 229 72 PTHR31218:SF7 none none none
PANTHER 1 133 133 PTHR31218:SF7 none none none
Phobius 225 262 38 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 99 120 22 SSF103481 none none none
SUPERFAMILY 151 226 76 SSF103481 none none none
Phobius 114 141 28 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 80 90 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 59 79 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 167 177 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 142 166 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 199 203 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 15 39 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 40 58 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 14 14 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

6 Localization

Analysis Start End Length
TMHMM 142 164 22
TMHMM 91 113 22
TMHMM 17 39 22
TMHMM 59 78 19
TMHMM 176 198 22
TMHMM 202 224 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 3 0.784 0.048 NON-PLANT 25