Protein : Qrob_P0032660.2 Q. robur
Protein Identifier  ? Qrob_P0032660.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 236  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa020036mg 1 235 + 235 Gaps:8 65.83 360 64.56 1e-96 hypothetical protein
blastp_kegg lcl|pxb:103936452 1 235 + 235 Gaps:9 64.20 352 65.04 9e-92 WAT1-related protein At5g40230-like
blastp_kegg lcl|pxb:103936432 1 235 + 235 Gaps:9 64.20 352 65.04 9e-92 WAT1-related protein At5g40230-like
blastp_kegg lcl|pmum:103330182 1 235 + 235 Gaps:16 64.91 721 55.13 4e-89 uncharacterized LOC103330182
blastp_kegg lcl|mdm:103442769 1 235 + 235 Gaps:11 70.20 651 53.61 9e-89 WAT1-related protein At5g40240-like
blastp_kegg lcl|brp:103850166 1 230 + 230 Gaps:6 61.54 364 57.59 3e-88 WAT1-related protein At5g40240-like
blastp_kegg lcl|tcc:TCM_016840 1 231 + 231 Gaps:4 64.54 361 59.23 2e-87 Nodulin MtN21 /EamA-like transporter family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_016838 1 231 + 231 Gaps:4 64.54 361 60.09 2e-86 Nodulin MtN21 /EamA-like transporter family protein putative
blastp_kegg lcl|vvi:100264674 1 232 + 232 none 64.62 359 62.07 1e-85 auxin-induced protein 5NG4-like
blastp_kegg lcl|pop:POPTR_0001s36190g 1 232 + 232 Gaps:4 63.54 362 59.13 5e-84 nodulin MtN21 family protein
blastp_uniprot_sprot sp|Q9FL08|WTR42_ARATH 1 230 + 230 Gaps:10 61.41 368 57.52 2e-85 WAT1-related protein At5g40240 OS Arabidopsis thaliana GN At5g40240 PE 2 SV 1
blastp_uniprot_sprot sp|F4KHA8|WTR41_ARATH 1 230 + 230 Gaps:10 61.08 370 57.96 1e-84 WAT1-related protein At5g40230 OS Arabidopsis thaliana GN At5g40230 PE 3 SV 1
blastp_uniprot_sprot sp|F4JK59|WTR33_ARATH 1 223 + 223 Gaps:13 62.25 347 55.56 1e-66 WAT1-related protein At4g15540 OS Arabidopsis thaliana GN At4g15540 PE 2 SV 1
blastp_uniprot_sprot sp|Q94JU2|WTR18_ARATH 1 231 + 231 Gaps:15 64.85 367 47.48 4e-65 WAT1-related protein At3g28050 OS Arabidopsis thaliana GN At3g28050 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYZ7|WTR20_ARATH 1 231 + 231 Gaps:10 63.06 360 42.73 2e-51 WAT1-related protein At3g28070 OS Arabidopsis thaliana GN At3g28070 PE 2 SV 1
blastp_uniprot_sprot sp|Q945L4|WTR40_ARATH 1 232 + 232 Gaps:20 63.13 339 46.26 4e-51 WAT1-related protein At5g40210 OS Arabidopsis thaliana GN At5g40210 PE 2 SV 1
blastp_uniprot_sprot sp|Q56X95|WTR23_ARATH 1 205 + 205 Gaps:4 58.31 355 45.89 7e-48 WAT1-related protein At3g28130 OS Arabidopsis thaliana GN At3g28130 PE 2 SV 1
blastp_uniprot_sprot sp|F4IYZ0|WTR21_ARATH 1 231 + 231 Gaps:11 63.69 358 43.42 2e-47 WAT1-related protein At3g28080 OS Arabidopsis thaliana GN At3g28080 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LRS5|WTR22_ARATH 1 227 + 227 Gaps:11 63.46 353 41.52 6e-44 WAT1-related protein At3g28100 OS Arabidopsis thaliana GN At3g28100 PE 2 SV 1
blastp_uniprot_sprot sp|F4I5D5|WTR11_ARATH 3 213 + 211 Gaps:11 57.60 375 36.11 1e-32 WAT1-related protein At1g70260 OS Arabidopsis thaliana GN At1g70260 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 1 231 + 231 Gaps:9 63.69 358 42.54 5e-42 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 119 203 85 SSF103481 none none none
Phobius 59 79 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 182 201 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 177 181 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 156 176 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 80 90 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 32 58 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 206 206 PTHR31218:SF7 none none none
Phobius 202 235 34 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 145 155 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 114 124 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 206 206 PTHR31218 none none IPR030184
Phobius 125 144 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 12 31 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 91 113 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

6 Localization

Analysis Start End Length
TMHMM 92 111 19
TMHMM 20 42 22
TMHMM 155 177 22
TMHMM 57 79 22
TMHMM 182 201 19
TMHMM 126 148 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 31   Secretory pathway 5 0.446 0.200 NON-PLANT 31