Protein : Qrob_P0022160.2 Q. robur
Protein Identifier  ? Qrob_P0022160.2 Organism . Name  Quercus robur
Score  17.0 Score Type  egn
Protein Description  (M=5) PTHR22601//PTHR22601:SF0 - ISP4 LIKE PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 371  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101297081 110 344 + 235 Gaps:65 40.16 747 61.00 4e-115 oligopeptide transporter 7-like
blastp_kegg lcl|cit:102623775 110 344 + 235 Gaps:65 39.95 751 60.33 6e-114 oligopeptide transporter 7-like
blastp_kegg lcl|pmum:103340216 110 344 + 235 Gaps:65 40.65 738 61.00 9e-114 oligopeptide transporter 7-like
blastp_kegg lcl|pper:PRUPE_ppa002122mg 110 344 + 235 Gaps:65 42.08 713 60.33 4e-113 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0573130 110 344 + 235 Gaps:65 39.32 763 60.67 9e-113 Oligopeptide transporter putative
blastp_kegg lcl|vvi:100262585 110 344 + 235 Gaps:65 39.53 759 59.00 2e-112 oligopeptide transporter 7-like
blastp_kegg lcl|pxb:103967801 110 344 + 235 Gaps:65 40.82 735 59.67 3e-112 oligopeptide transporter 7-like
blastp_kegg lcl|tcc:TCM_000190 110 344 + 235 Gaps:65 40.49 741 58.67 2e-111 Oligopeptide transporter 7 isoform 1
blastp_kegg lcl|pop:POPTR_0007s09650g 110 344 + 235 Gaps:65 40.00 750 59.33 3e-111 hypothetical protein
blastp_kegg lcl|sly:101244460 110 344 + 235 Gaps:65 39.16 766 58.33 2e-110 oligopeptide transporter 7-like
blastp_uniprot_sprot sp|O82485|OPT7_ARATH 110 344 + 235 Gaps:68 38.77 766 50.51 1e-85 Oligopeptide transporter 7 OS Arabidopsis thaliana GN OPT7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9T095|OPT6_ARATH 110 342 + 233 Gaps:67 40.76 736 44.67 2e-75 Oligopeptide transporter 6 OS Arabidopsis thaliana GN OPT6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJD1|OPT8_ARATH 110 342 + 233 Gaps:67 40.93 733 44.33 5e-73 Oligopeptide transporter 8 OS Arabidopsis thaliana GN OPT8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJD2|OPT9_ARATH 110 342 + 233 Gaps:67 40.49 741 45.33 1e-69 Oligopeptide transporter 9 OS Arabidopsis thaliana GN OPT9 PE 2 SV 1
blastp_uniprot_sprot sp|O04514|OPT2_ARATH 110 342 + 233 Gaps:65 40.60 734 40.60 3e-67 Oligopeptide transporter 2 OS Arabidopsis thaliana GN OPT2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FME8|OPT4_ARATH 110 342 + 233 Gaps:65 40.88 729 38.26 9e-63 Oligopeptide transporter 4 OS Arabidopsis thaliana GN OPT4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FG72|OPT1_ARATH 110 344 + 235 Gaps:76 40.40 755 39.34 8e-60 Oligopeptide transporter 1 OS Arabidopsis thaliana GN OPT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUA4|OPT5_ARATH 110 344 + 235 Gaps:70 40.50 753 39.34 5e-59 Oligopeptide transporter 5 OS Arabidopsis thaliana GN OPT5 PE 2 SV 1
blastp_uniprot_sprot sp|O23482|OPT3_ARATH 110 336 + 227 Gaps:66 39.76 737 37.88 2e-57 Oligopeptide transporter 3 OS Arabidopsis thaliana GN OPT3 PE 2 SV 3
blastp_uniprot_sprot sp|O14031|PGT1_SCHPO 104 323 + 220 Gaps:62 33.14 851 28.01 8e-30 Glutathione transporter 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pgt1 PE 1 SV 1
rpsblast_cdd gnl|CDD|200045 110 342 + 233 Gaps:85 45.05 657 26.69 1e-36 TIGR00728 OPT_sfam oligopeptide transporters OPT superfamily. This superfamily has two main branches. One branch contains a tetrapeptide transporter demonstrated experimentally in three different species of yeast. The other family contains EspB of Myxococcus xanthus a protein required for normal rather than delayed sporulation after cellular aggregation its role is unknown but is compatible with transport of a signalling molecule.Homology between the two branches of the superfamily is seen most easily at the ends of the protein. The central regions are poorly conserved within each branch and may not be homologous between branches.
rpsblast_cdd gnl|CDD|129810 109 323 + 215 Gaps:60 40.38 681 26.18 1e-35 TIGR00727 ISP4_OPT small oligopeptide transporter OPT family. This model represents a family of transporters of small oligopeptides demonstrated experimentally in three different species of yeast. A set of related proteins from the plant Arabidopsis thaliana forms an outgroup to the yeast set by neighbor joining analysis but is remarkably well conserved and is predicted here to have equivalent function.
rpsblast_cdd gnl|CDD|190551 109 367 + 259 Gaps:91 51.05 619 25.95 1e-32 pfam03169 OPT OPT oligopeptide transporter protein. The OPT family of oligopeptide transporters is distinct from the ABC pfam00005 and PTR pfam00854 transporter families. OPT transporters were first recognised in fungi (Candida albicans and Schizosaccharomyces pombe) but this alignment also includes orthologues from Arabidopsis thaliana. OPT transporters are thought to have 12-14 transmembrane domains and contain the following motif: SPYxEVRxxVxxxDDP.
rpsblast_kog gnl|CDD|37473 110 342 + 233 Gaps:69 38.63 761 44.90 2e-72 KOG2262 KOG2262 KOG2262 Sexual differentiation process protein ISP4 [Signal transduction mechanisms].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 116 140 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 370 370 1 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 115 115 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 316 352 37 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 110 344 235 PTHR22601 none none none
Pfam 264 368 105 PF03169 none OPT oligopeptide transporter protein IPR004813
Pfam 99 268 170 PF03169 none OPT oligopeptide transporter protein IPR004813
PANTHER 110 344 235 PTHR22601:SF0 none none none
Phobius 216 235 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 294 315 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 353 369 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 236 259 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 191 215 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 141 190 50 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 260 293 34 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

5 Localization

Analysis Start End Length
TMHMM 294 316 22
TMHMM 186 208 22
TMHMM 236 258 22
TMHMM 352 369 17
TMHMM 118 140 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 84   Mitochondrion 4 0.054 0.673 NON-PLANT 84