Protein : Qrob_P0019910.2 Q. robur
Protein Identifier  ? Qrob_P0019910.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PF09588 - YqaJ-like viral recombinase domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 382  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0004518 nuclease activity Catalysis of the hydrolysis of ester linkages within nucleic acids.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007070mg 1 380 + 380 Gaps:7 100.00 383 69.71 0.0 hypothetical protein
blastp_kegg lcl|pmum:103321956 1 380 + 380 Gaps:7 100.00 383 69.19 0.0 uncharacterized LOC103321956
blastp_kegg lcl|mdm:103452085 1 380 + 380 Gaps:9 100.00 385 67.79 0.0 uncharacterized LOC103452085
blastp_kegg lcl|mdm:103431874 1 379 + 379 Gaps:11 99.74 387 68.65 1e-180 uncharacterized LOC103431874
blastp_kegg lcl|mdm:103403110 1 379 + 379 Gaps:11 99.74 387 68.65 1e-180 uncharacterized LOC103403110
blastp_kegg lcl|cic:CICLE_v10031836mg 1 381 + 381 Gaps:5 99.74 379 67.46 6e-180 hypothetical protein
blastp_kegg lcl|cit:102613683 1 381 + 381 Gaps:5 99.74 379 67.46 6e-180 uncharacterized LOC102613683
blastp_kegg lcl|pxb:103949883 1 379 + 379 Gaps:11 99.74 387 68.39 2e-179 uncharacterized LOC103949883
blastp_kegg lcl|pop:POPTR_0010s06490g 1 381 + 381 Gaps:13 100.00 384 67.45 6e-179 POPTRDRAFT_230268 hypothetical protein
blastp_kegg lcl|tcc:TCM_010750 71 381 + 311 none 100.00 311 76.53 7e-175 Restriction endonuclease
blastp_pdb 3sz5_A 139 323 + 185 Gaps:21 87.04 216 32.45 4e-11 mol:protein length:216 Exonuclease
blastp_pdb 3sz4_A 139 323 + 185 Gaps:21 87.04 216 32.45 4e-11 mol:protein length:216 Exonuclease
blastp_pdb 3syy_A 139 323 + 185 Gaps:21 87.04 216 32.45 4e-11 mol:protein length:216 Exonuclease
rpsblast_cdd gnl|CDD|192321 143 283 + 141 Gaps:3 100.00 140 33.57 1e-30 pfam09588 YqaJ YqaJ-like viral recombinase domain. This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction It has a preference for 5'-phosphorylated DNA ends. It thus forms part of the two-component SynExo viral recombinase functional unit.
rpsblast_cdd gnl|CDD|200235 139 295 + 157 Gaps:10 97.39 153 33.56 6e-16 TIGR03033 phage_rel_nuc putative phage-type endonuclease. Members of this protein family are found often in phage genomes and in prokaryotic genomes in uncharacterized regions that resemble integrated prophage regions.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 138 294 157 TIGR03033 none phage_rel_nuc: putative phage-type endonuclease IPR017482
Gene3D 131 328 198 G3DSA:3.90.320.10 none none IPR011604
PANTHER 226 324 99 PTHR10992 none none none
SUPERFAMILY 137 330 194 SSF52980 none none IPR011335
Pfam 143 286 144 PF09588 none YqaJ-like viral recombinase domain IPR019080
PANTHER 226 324 99 PTHR10992:SF753 none none none

0 Localization

0 Qtllist

0 Targeting