Protein : Qrob_P0010150.2 Q. robur
Protein Identifier  ? Qrob_P0010150.2 Organism . Name  Quercus robur
Protein Description  (M=3) K09420 - myb proto-oncogene protein Alias (in v1)  Qrob_P0702820.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 996  
Kegg Orthology  K09420
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100255911 1 995 + 995 Gaps:95 100.00 1050 52.86 0.0 myb-related protein 3R-1-like
blastp_kegg lcl|vvi:100261001 10 995 + 986 Gaps:133 99.62 1051 45.46 0.0 myb-related protein 3R-1-like
blastp_kegg lcl|rcu:RCOM_0802980 28 995 + 968 Gaps:200 98.09 1046 46.30 0.0 myb putative
blastp_kegg lcl|tcc:TCM_047091 24 995 + 972 Gaps:131 98.47 1043 44.89 0.0 Myb domain protein 3r-4 putative
blastp_kegg lcl|cic:CICLE_v10007316mg 25 995 + 971 Gaps:132 98.57 1046 43.84 0.0 hypothetical protein
blastp_kegg lcl|cit:102622459 25 995 + 971 Gaps:136 98.57 1046 43.65 0.0 myb-related protein 3R-1-like
blastp_kegg lcl|pop:POPTR_0006s25840g 35 995 + 961 Gaps:103 97.37 1027 44.30 0.0 POPTRDRAFT_561783 myb family transcription factor family protein
blastp_kegg lcl|mdm:103441179 25 995 + 971 Gaps:156 98.53 1020 45.37 0.0 myb-related protein 3R-1
blastp_kegg lcl|pper:PRUPE_ppa000676mg 25 995 + 971 Gaps:186 98.55 1038 44.77 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0018s00710g 35 995 + 961 Gaps:148 97.27 1027 44.64 0.0 POPTRDRAFT_825691 hypothetical protein
blastp_pdb 1h89_C 47 199 + 153 Gaps:1 95.60 159 68.42 2e-67 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1h88_C 47 199 + 153 Gaps:1 95.60 159 68.42 2e-67 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1h8a_C 47 199 + 153 Gaps:1 96.09 128 73.98 5e-58 mol:protein length:128 MYB TRANSFORMING PROTEIN
blastp_pdb 1a5j_A 47 201 + 155 Gaps:1 98.18 110 70.37 6e-49 mol:protein length:110 B-MYB
blastp_pdb 1gv2_A 47 199 + 153 Gaps:1 100.00 105 72.38 3e-47 mol:protein length:105 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1msf_C 47 199 + 153 Gaps:1 99.05 105 72.12 1e-46 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 1mse_C 47 199 + 153 Gaps:1 99.05 105 72.12 1e-46 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 3zqc_J 47 201 + 155 Gaps:1 80.15 131 60.95 2e-26 mol:protein length:131 MYB3
blastp_pdb 3zqc_G 47 201 + 155 Gaps:1 80.15 131 60.95 2e-26 mol:protein length:131 MYB3
blastp_pdb 3zqc_D 47 201 + 155 Gaps:1 80.15 131 60.95 2e-26 mol:protein length:131 MYB3
blastp_uniprot_sprot sp|Q9S7G7|MB3R1_ARATH 35 662 + 628 Gaps:18 50.52 776 58.93 3e-96 Myb-related protein 3R-1 OS Arabidopsis thaliana GN MYB3R-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q08759|MYB_XENLA 35 198 + 164 none 26.28 624 60.98 3e-63 Transcriptional activator Myb OS Xenopus laevis GN myb PE 2 SV 1
blastp_uniprot_sprot sp|P10242|MYB_HUMAN 47 200 + 154 Gaps:1 25.00 640 66.88 4e-63 Transcriptional activator Myb OS Homo sapiens GN MYB PE 1 SV 2
blastp_uniprot_sprot sp|P01103|MYB_CHICK 47 229 + 183 Gaps:12 27.30 641 65.71 5e-63 Transcriptional activator Myb OS Gallus gallus GN MYB PE 1 SV 1
blastp_uniprot_sprot sp|P46200|MYB_BOVIN 47 200 + 154 Gaps:1 25.00 640 66.88 6e-63 Transcriptional activator Myb OS Bos taurus GN MYB PE 2 SV 1
blastp_uniprot_sprot sp|P06876|MYB_MOUSE 47 200 + 154 Gaps:1 25.16 636 66.88 7e-63 Transcriptional activator Myb OS Mus musculus GN Myb PE 1 SV 2
blastp_uniprot_sprot sp|P34127|MYBA_DICDI 49 197 + 149 none 12.11 1230 67.11 6e-62 Myb-like protein A OS Dictyostelium discoideum GN mybA PE 4 SV 2
blastp_uniprot_sprot sp|Q03237|MYBB_CHICK 47 199 + 153 Gaps:1 22.16 686 65.79 6e-61 Myb-related protein B OS Gallus gallus GN MYBL2 PE 1 SV 1
blastp_uniprot_sprot sp|P51960|MYBA_MOUSE 47 207 + 161 Gaps:3 21.57 751 64.81 1e-60 Myb-related protein A OS Mus musculus GN Mybl1 PE 2 SV 2
blastp_uniprot_sprot sp|P10243|MYBA_HUMAN 47 207 + 161 Gaps:3 21.54 752 64.81 1e-60 Myb-related protein A OS Homo sapiens GN MYBL1 PE 1 SV 2

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 47 92 46 PF00249 none Myb-like DNA-binding domain IPR001005
PANTHER 36 198 163 PTHR10641 none none none
PANTHER 843 850 8 PTHR10641 none none none
ProSiteProfiles 93 148 56 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
Pfam 101 158 58 PF13921 none Myb-like DNA-binding domain none
PANTHER 843 850 8 PTHR10641:SF492 none none none
PANTHER 36 198 163 PTHR10641:SF492 none none none
Gene3D 103 151 49 G3DSA:1.10.10.60 none none IPR009057
Gene3D 47 102 56 G3DSA:1.10.10.60 none none IPR009057
ProSiteProfiles 149 199 51 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
ProSiteProfiles 41 92 52 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
SMART 45 94 50 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SMART 97 146 50 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SMART 149 197 49 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SUPERFAMILY 95 191 97 SSF46689 none none IPR009057
Gene3D 152 199 48 G3DSA:1.10.10.60 none none IPR009057
SUPERFAMILY 47 102 56 SSF46689 none none IPR009057

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 12   Mitochondrion 5 0.040 0.571 NON-PLANT 12