Protein : Qrob_P0006070.2 Q. robur
Protein Identifier  ? Qrob_P0006070.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG2166//KOG2167//KOG2285 - Cullins [Cell cycle control cell division chromosome partitioning]. // Cullins [Cell cycle control cell division chromosome partitioning]. // E3 ubiquitin ligase Cullin 1 component [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 197  
Kegg Orthology  K03869
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0031625 ubiquitin protein ligase binding Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101204239 8 195 + 188 Gaps:4 26.19 733 72.40 1e-89 cullin-3A-like
blastp_kegg lcl|cmo:103487010 8 195 + 188 Gaps:4 26.19 733 72.40 1e-89 cullin-3A-like
blastp_kegg lcl|cic:CICLE_v10011157mg 8 195 + 188 Gaps:4 26.19 733 70.31 6e-87 hypothetical protein
blastp_kegg lcl|mdm:103404435 8 195 + 188 Gaps:4 26.19 733 69.79 7e-87 cullin-3A-like
blastp_kegg lcl|cit:102630361 8 195 + 188 Gaps:4 26.19 733 70.31 7e-87 cullin-3B-like
blastp_kegg lcl|pper:PRUPE_ppa001982mg 8 195 + 188 Gaps:4 26.19 733 70.31 1e-86 hypothetical protein
blastp_kegg lcl|pxb:103933074 8 195 + 188 Gaps:4 26.19 733 69.27 4e-86 cullin-3A-like
blastp_kegg lcl|mdm:103411193 8 195 + 188 Gaps:4 26.19 733 68.75 2e-84 cullin-3B-like
blastp_kegg lcl|mdm:103442346 8 195 + 188 Gaps:4 26.19 733 68.75 2e-84 cullin-3B-like
blastp_kegg lcl|vvi:100254227 8 195 + 188 Gaps:4 26.19 733 68.23 1e-83 cullin-3B-like
blastp_pdb 4apf_B 8 195 + 188 Gaps:12 50.52 388 37.76 1e-34 mol:protein length:388 CULLIN 3
blastp_pdb 4ap2_B 8 195 + 188 Gaps:12 47.80 410 37.76 1e-34 mol:protein length:410 CULLIN-3
blastp_pdb 2hye_C 13 196 + 184 Gaps:9 24.90 759 27.51 4e-17 mol:protein length:759 Cullin-4A
blastp_pdb 4a0k_A 13 196 + 184 Gaps:9 25.47 742 27.51 4e-17 mol:protein length:742 CULLIN-4A
blastp_pdb 1ldk_A 20 194 + 175 Gaps:24 49.24 396 26.15 6e-13 mol:protein length:396 CULLIN HOMOLOG
blastp_pdb 1ldj_A 20 194 + 175 Gaps:24 25.66 760 26.67 1e-12 mol:protein length:760 Cullin homolog 1
blastp_pdb 1u6g_A 20 194 + 175 Gaps:24 25.13 776 26.67 1e-12 mol:protein length:776 Cullin homolog 1
blastp_pdb 4a64_D 13 195 + 183 Gaps:9 53.11 354 24.47 2e-12 mol:protein length:354 CULLIN-4B
blastp_pdb 4a64_C 13 195 + 183 Gaps:9 53.11 354 24.47 2e-12 mol:protein length:354 CULLIN-4B
blastp_pdb 4a64_B 13 195 + 183 Gaps:9 53.11 354 24.47 2e-12 mol:protein length:354 CULLIN-4B
blastp_uniprot_sprot sp|Q9ZVH4|CUL3A_ARATH 8 195 + 188 Gaps:4 26.23 732 59.38 2e-71 Cullin-3A OS Arabidopsis thaliana GN CUL3A PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9L0|CUL3B_ARATH 8 195 + 188 Gaps:4 26.23 732 55.73 4e-66 Cullin-3B OS Arabidopsis thaliana GN CUL3B PE 1 SV 1
blastp_uniprot_sprot sp|Q54NZ5|CUL3_DICDI 8 196 + 189 Gaps:7 25.49 769 39.29 2e-37 Cullin-3 OS Dictyostelium discoideum GN culC PE 3 SV 1
blastp_uniprot_sprot sp|Q6GPF3|CUL3B_XENLA 8 195 + 188 Gaps:12 25.52 768 37.76 5e-33 Cullin-3-B OS Xenopus laevis GN cul3b PE 1 SV 1
blastp_uniprot_sprot sp|Q13618|CUL3_HUMAN 8 195 + 188 Gaps:12 25.52 768 37.76 5e-33 Cullin-3 OS Homo sapiens GN CUL3 PE 1 SV 2
blastp_uniprot_sprot sp|Q6DE95|CUL3A_XENLA 8 195 + 188 Gaps:12 25.52 768 37.76 5e-33 Cullin-3-A OS Xenopus laevis GN cul3a PE 1 SV 1
blastp_uniprot_sprot sp|A4IHP4|CUL3_XENTR 8 195 + 188 Gaps:12 25.52 768 37.76 6e-33 Cullin-3 OS Xenopus tropicalis GN cul3 PE 2 SV 1
blastp_uniprot_sprot sp|B5DF89|CUL3_RAT 8 195 + 188 Gaps:12 25.52 768 37.76 6e-33 Cullin-3 OS Rattus norvegicus GN Cul3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9JLV5|CUL3_MOUSE 8 195 + 188 Gaps:12 25.52 768 37.76 6e-33 Cullin-3 OS Mus musculus GN Cul3 PE 1 SV 1
blastp_uniprot_sprot sp|Q94AH6|CUL1_ARATH 17 194 + 178 Gaps:6 24.93 738 29.89 2e-23 Cullin-1 OS Arabidopsis thaliana GN CUL1 PE 1 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 8 195 188 PTHR11932:SF59 none none none
PANTHER 8 195 188 PTHR11932 none none none
Pfam 6 195 190 PF00888 none Cullin family IPR001373
SUPERFAMILY 6 195 190 SSF74788 none none IPR016159
Gene3D 7 101 95 G3DSA:1.20.1310.10 none none none
Coils 176 197 22 Coil none none none
Gene3D 103 195 93 G3DSA:1.20.1310.10 none none none

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting