Protein : Qrob_P0001900.2 Q. robur
Protein Identifier  ? Qrob_P0001900.2 Organism . Name  Quercus robur
Score  51.3 Score Type  egn
Protein Description  (M=2) PTHR12526:SF27 - SUCROSE SYNTHASE Code Enzyme  EC:2.4.1.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 861  
Kegg Orthology  K00695
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005985 sucrose metabolic process The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.
GO:0016157 sucrose synthase activity Catalysis of the reaction: UDP-glucose + D-fructose = UDP + sucrose.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_021253 1 801 + 801 Gaps:2 99.38 804 88.11 0.0 Sucrose synthase 2 isoform 1
blastp_kegg lcl|mdm:103414598 1 805 + 805 Gaps:2 99.75 809 86.25 0.0 sucrose synthase 2-like
blastp_kegg lcl|vvi:100243135 1 796 + 796 none 98.51 808 87.06 0.0 sucrose synthase 2-like
blastp_kegg lcl|pxb:103943695 1 801 + 801 Gaps:2 99.88 800 86.73 0.0 sucrose synthase 2-like
blastp_kegg lcl|pmum:103323061 1 796 + 796 none 99.50 800 86.31 0.0 sucrose synthase 2-like
blastp_kegg lcl|pper:PRUPE_ppa001573mg 1 801 + 801 Gaps:2 99.88 800 86.36 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10004341mg 1 796 + 796 none 98.51 808 85.30 0.0 hypothetical protein
blastp_kegg lcl|cit:102629055 1 796 + 796 none 98.51 808 85.30 0.0 sucrose synthase 2-like
blastp_kegg lcl|fve:101298794 1 789 + 789 none 95.52 826 85.93 0.0 sucrose synthase 2-like
blastp_kegg lcl|aly:ARALYDRAFT_494980 1 796 + 796 Gaps:2 98.39 807 83.25 0.0 hypothetical protein
blastp_pdb 3s29_H 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_G 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_F 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_E 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_D 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_C 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_B 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_A 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s28_H 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s28_G 2 792 + 791 Gaps:3 96.57 816 68.40 0.0 mol:protein length:816 Sucrose synthase 1
blastp_uniprot_sprot sp|Q00917|SUS2_ARATH 1 796 + 796 Gaps:2 98.39 807 82.87 0.0 Sucrose synthase 2 OS Arabidopsis thaliana GN SUS2 PE 2 SV 3
blastp_uniprot_sprot sp|O24301|SUS2_PEA 1 796 + 796 Gaps:2 98.15 809 80.86 0.0 Sucrose synthase 2 OS Pisum sativum GN SUS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M111|SUS3_ARATH 2 792 + 791 none 97.78 809 76.99 0.0 Sucrose synthase 3 OS Arabidopsis thaliana GN SUS3 PE 1 SV 1
blastp_uniprot_sprot sp|Q10LP5|SUS4_ORYSJ 1 796 + 796 Gaps:2 98.15 809 77.46 0.0 Sucrose synthase 4 OS Oryza sativa subsp. japonica GN SUS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q42652|SUSY_BETVU 51 790 + 740 Gaps:2 96.61 766 78.24 0.0 Sucrose synthase (Fragment) OS Beta vulgaris GN SS1 PE 2 SV 1
blastp_uniprot_sprot sp|P30298|SUS2_ORYSJ 1 796 + 796 Gaps:5 97.90 808 70.54 0.0 Sucrose synthase 2 OS Oryza sativa subsp. japonica GN SUS2 PE 1 SV 2
blastp_uniprot_sprot sp|P13708|SUSY_SOYBN 1 789 + 789 Gaps:3 97.64 805 71.50 0.0 Sucrose synthase OS Glycine max GN SS PE 1 SV 2
blastp_uniprot_sprot sp|Q41608|SUS1_TULGE 1 800 + 800 Gaps:6 98.63 805 70.78 0.0 Sucrose synthase 1 OS Tulipa gesneriana PE 2 SV 1
blastp_uniprot_sprot sp|Q01390|SUSY_VIGRR 1 796 + 796 Gaps:3 98.51 805 70.74 0.0 Sucrose synthase OS Vigna radiata var. radiata GN SS1 PE 1 SV 1
blastp_uniprot_sprot sp|P04712|SUS1_MAIZE 1 790 + 790 Gaps:5 97.88 802 71.08 0.0 Sucrose synthase 1 OS Zea mays GN SH-1 PE 2 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 748 766 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 286 755 470 SSF53756 none none none
PANTHER 556 779 224 PTHR12526:SF27 "KEGG:00500+2.4.1.13","MetaCyc:PWY-3801";signature_desc=SUCROSE SYNTHASE none IPR012820
PANTHER 93 476 384 PTHR12526:SF27 "KEGG:00500+2.4.1.13","MetaCyc:PWY-3801";signature_desc=SUCROSE SYNTHASE none IPR012820
PANTHER 507 532 26 PTHR12526:SF27 "KEGG:00500+2.4.1.13","MetaCyc:PWY-3801";signature_desc=SUCROSE SYNTHASE none IPR012820
Pfam 1 545 545 PF00862 "KEGG:00500+2.4.1.13","MetaCyc:PWY-3801" Sucrose synthase IPR000368
TIGRFAM 13 790 778 TIGR02470 "KEGG:00500+2.4.1.13","MetaCyc:PWY-3801" sucr_synth: sucrose synthase IPR012820
PANTHER 93 476 384 PTHR12526 none none none
PANTHER 507 532 26 PTHR12526 none none none
Phobius 1 747 747 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 556 779 224 PTHR12526 none none none
Phobius 834 859 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 860 860 1 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 787 814 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 549 718 170 PF00534 none Glycosyl transferases group 1 IPR001296
Phobius 767 786 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 551 737 187 G3DSA:3.40.50.2000 none none none
Phobius 815 833 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 2 23 22 Coil none none none

1 Localization

Analysis Start End Length
TMHMM 789 811 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting