Protein : Qrob_P0001810.2 Q. robur
Protein Identifier  ? Qrob_P0001810.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 221  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa016616mg 1 220 + 220 Gaps:4 97.80 227 77.93 8e-113 hypothetical protein
blastp_kegg lcl|pmum:103338888 1 220 + 220 Gaps:4 97.80 227 77.48 3e-112 germin-like protein subfamily 1 member 20
blastp_kegg lcl|pper:PRUPE_ppa016284mg 2 220 + 219 Gaps:4 97.79 226 78.28 6e-111 hypothetical protein
blastp_kegg lcl|sot:102586196 7 220 + 214 Gaps:6 95.61 228 75.69 9e-110 germin-like protein subfamily 1 member 20-like
blastp_kegg lcl|pper:PRUPE_ppa016020mg 2 220 + 219 Gaps:4 97.79 226 77.38 2e-109 hypothetical protein
blastp_kegg lcl|sot:102584547 7 220 + 214 Gaps:6 95.61 228 75.23 4e-109 germin-like protein subfamily 1 member 20-like
blastp_kegg lcl|pper:PRUPE_ppa020162mg 2 220 + 219 Gaps:4 97.79 226 78.28 6e-109 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa026225mg 2 220 + 219 Gaps:4 97.79 226 76.47 6e-109 hypothetical protein
blastp_kegg lcl|pmum:103336250 2 220 + 219 Gaps:12 97.86 234 76.42 1e-108 germin-like protein subfamily 1 member 16
blastp_kegg lcl|pmum:103336253 2 220 + 219 Gaps:6 97.81 228 78.03 2e-108 germin-like protein subfamily 1 member 11
blastp_pdb 2et7_A 25 220 + 196 Gaps:6 97.51 201 48.47 2e-54 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 25 220 + 196 Gaps:6 97.51 201 47.96 2e-53 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 25 220 + 196 Gaps:6 97.51 201 47.96 2e-53 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2ete_B 25 220 + 196 Gaps:6 97.51 201 47.96 2e-53 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 25 220 + 196 Gaps:6 97.51 201 47.96 2e-53 mol:protein length:201 Oxalate oxidase 1
blastp_uniprot_sprot sp|Q9SFF9|GL17_ARATH 13 220 + 208 Gaps:4 90.83 229 72.60 7e-100 Germin-like protein subfamily 1 member 7 OS Arabidopsis thaliana GN At3g05950 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC8|GL116_ARATH 2 220 + 219 Gaps:4 98.65 222 66.21 5e-97 Germin-like protein subfamily 1 member 16 OS Arabidopsis thaliana GN At5g39130 PE 2 SV 1
blastp_uniprot_sprot sp|P92996|GL120_ARATH 2 220 + 219 Gaps:4 98.65 222 65.75 6e-96 Germin-like protein subfamily 1 member 20 OS Arabidopsis thaliana GN GLP5A PE 1 SV 1
blastp_uniprot_sprot sp|P92999|GL118_ARATH 2 220 + 219 Gaps:4 98.65 222 65.75 9e-96 Germin-like protein subfamily 1 member 18 OS Arabidopsis thaliana GN GLP2A PE 2 SV 2
blastp_uniprot_sprot sp|P92997|GL113_ARATH 2 220 + 219 Gaps:3 99.10 222 64.09 5e-94 Germin-like protein subfamily 1 member 13 OS Arabidopsis thaliana GN GLP6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FID0|GL114_ARATH 2 220 + 219 Gaps:3 99.10 222 64.09 3e-92 Germin-like protein subfamily 1 member 14 OS Arabidopsis thaliana GN At5g39110 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FIC6|GL117_ARATH 2 220 + 219 Gaps:4 99.10 221 65.75 8e-92 Germin-like protein subfamily 1 member 17 OS Arabidopsis thaliana GN At5g39150 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC9|GL115_ARATH 2 220 + 219 Gaps:4 99.10 221 65.75 1e-91 Germin-like protein subfamily 1 member 15 OS Arabidopsis thaliana GN At5g39120 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL89|GL119_ARATH 14 220 + 207 Gaps:3 94.12 221 67.31 1e-91 Germin-like protein subfamily 1 member 19 OS Arabidopsis thaliana GN At5g39180 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M8X6|GL16_ARATH 11 220 + 210 Gaps:4 92.51 227 68.10 1e-90 Germin-like protein subfamily 1 member 6 OS Arabidopsis thaliana GN At3g04200 PE 2 SV 1
rpsblast_cdd gnl|CDD|197904 69 214 + 146 Gaps:2 98.63 146 37.50 2e-30 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 65 214 + 150 Gaps:16 99.28 139 37.68 2e-27 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 220 219 PTHR31238 none none none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 24 220 197 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 25 220 196 SSF51182 none none IPR011051
PANTHER 2 220 219 PTHR31238:SF1 none none none
Gene3D 25 220 196 G3DSA:2.60.120.10 none none IPR014710
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
SMART 64 214 151 SM00835 none Cupin IPR006045
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 75 212 138 PF00190 none Cupin IPR006045
PRINTS 144 164 21 PR00325 none Germin signature IPR001929
PRINTS 177 192 16 PR00325 none Germin signature IPR001929
PRINTS 113 133 21 PR00325 none Germin signature IPR001929
ProSitePatterns 108 121 14 PS00725 none Germin family signature. IPR019780
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

4 Localization

Analysis Start End Length
SignalP_EUK 1 23 22
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_GRAM_POSITIVE 1 23 22
TMHMM 5 24 19

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.959 0.018 NON-PLANT 23