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2009

International,  COM (posters)

JOBIM 2009, Nantes, France

09 Jun 2009   The URGI plants and bioagressors genomic annotation system
Poster_Jobim_2009_Brault

Brault B, Alaux M, Legeai F, Reboux S, Luyten I, SidibeBocs S, Steinbach D, Quesneville H and Amselem J

The URGI genomic annotation platform, developed in the framework of the GnpAnnot project, relies on well known GMOD tools( http://gmod.org ): Apollo, Chado and GBrowse. Apollo is the graphical interface for visualization and annotation edition allowing curators to edit their genes according to evidences (transcript and protein similarity, comparative genomics). Manual annotations (gene curation validated/in progress) are saved in a dedicated Chado database and shared at the same time with other community annotations members. Validated genes/pseudogenes are then committed in the second Chado database accessible by GBrowse.


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Update: 10 May 2011
Creation date: 05 May 2010